Cololabis saira (Pacific saury): 133421930
Help
Entry
133421930 CDS
T09849
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00514
Other types of O-glycan biosynthesis
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
133421930 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133421930 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csai01003
]
133421930 (lfng)
Enzymes [BR:
csai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
133421930 (lfng)
Glycosyltransferases [BR:
csai01003
]
Glycan extension
O-Glycan
133421930 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
133421930
NCBI-ProteinID:
XP_061567717
LinkDB
All DBs
Position
21:complement(15169060..15176789)
Genome browser
AA seq
357 aa
AA seq
DB search
MLKNNAKKTAVVAGGSACVCVLLLLVAVQHHRGQLEQEPGAPAERDAPDRKGFSAYFTKL
TRGRREVEKPAGSSAAAAAEPPPAEDISAEDIFIAVKTTKKFHQSRLNLLLDTWISRNMK
QTYIFTDGEDEELKKKIGSHVINTNCSAAHSRQALSCKMAVEYDKFIESGKKWFCHVDDD
NYVNVRTLVKHLSQYPHTQDKYIGKPSLDRPIEATERLGDNKMKPVNFWFATGGAGFCVS
RGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVPLTRSNLFHSHLENLQQVS
RSEIHKQITLSYGMFENKSNIINLKGAFSVEEDPSRFKSVQCLLYPDTPWCPPQVAF
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaacaatgcaaagaagacggcggtggtggcgggcggctcggcgtgcgtgtgc
gtgctgctgctgctggtggccgtgcagcatcaccggggccagctggagcaggagcccgga
gccccggcggagcgggacgctcccgataggaagggattctcggcgtacttcaccaaactg
acccggggacggagggaggtggagaagccggcgggctcctccgccgccgccgccgcggag
ccgcctccggccgaggacatcagcgcggaggacatcttcatcgcggtgaagaccaccaag
aagttccaccagtcccggctcaacctgctgctggacacctggatctccagaaacatgaaa
cagacgtacatcttcacggacggagaagacgaggagcttaaaaagaagatcgggagtcat
gtgatcaacaccaactgctccgcagctcacagcaggcaagctctgtcctgcaagatggcg
gtggagtacgacaagttcatagagtcggggaaaaagtggttctgtcacgtggacgacgac
aactacgtgaatgttcggaccctggtgaagcacctgtctcagtacccgcacacccaggac
aaatacatcggcaaacccagtctggaccggcccatagaggccacggagaggctgggcgac
aacaagatgaaacccgtcaacttctggttcgccacggggggagccggtttctgcgtgagc
cggggtctggccctgaagatgagcccgtgggccagtggcggccacttcatgaatacggcg
gaaaagatccgcctgcctgacgactgcaccatcggctacatcatcgagtcggtcctgggg
gtcccgctgacccgaagtaacctgttccactcccacctggagaacctgcagcaggtgtcc
cggtctgagatccacaagcagatcaccctcagttatgggatgttcgaaaacaagagcaat
atcatcaatttgaaaggggctttttctgtggaggaggacccatcgaggttcaagtcggtg
cagtgtctgctgtatccagacacgccgtggtgtccgccccaggttgccttctag
DBGET
integrated database retrieval system
