KEGG   Cololabis saira (Pacific saury): 133423808
Entry
133423808         CDS       T09849                                 
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
  KO
K09446  interferon regulatory factor 5
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:csai00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    133423808 (irf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csai03000]
    133423808 (irf5)
Transcription factors [BR:csai03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    133423808 (irf5)
SSDB
Motif
Pfam: IRF-3 IRF
Other DBs
NCBI-GeneID: 133423808
NCBI-ProteinID: XP_061570074
LinkDB
Position
23:complement(8382382..8397032)
AA seq 504 aa
MSVQPRRIRLKPWLLLQVDGGRYPGLQWLEPEHRLFQIPWKHATRHTPVSEEENTIFKAW
AVETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEHPGTA
DGAEDDEEEMPNLMDHLTINPRIREPAAFSPFGLPGNGMFGSSPVIPVPWLSNGTLVSDV
PMTSDLAVTSGLAMAPDHQARGPMVDPGRFAQPAKLPETLQDLNPLPSSAASSSHPGLDP
METSSMGAAQNQTDPQNNQPCKYDLLSSIPLTDLELRFQYRGRSMGSLTVSNPQGCRLYY
GHLEPTPDQVDLFGPVSLQQVRFPGTAEVQNQKQRLYTEALLDVMDRGLILEIVEQDIYA
VRLCQCKVFWSGPGLPDRGHGPPNPMERERKIRVFSLNDFLQGLILFQKGEAPNPPPFEV
YFCFGEDWPDKKPKEKKLIMVQVVPVVARILTEMFSGELSWSTDSIRLQISNPDVKDRTV
EQFKELQRLLQSQQIQGPWNPNGP
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgagcgtccagccccgcaggatccggctcaagccctggctgctgctgcaggtggacggc
ggccgctacccgggcctgcagtggctcgaaccggagcaccggctcttccagatcccctgg
aaacacgccacgcgccacacgcccgtctctgaggaggagaacaccatcttcaaggcctgg
gccgtggagacggggaagtaccaggagggcgtggacgaacctgacccggccaagtggaag
gccaacctccgctgcgcgctcaacaagagccgcgagttccagctgaaatatgacggcacc
aaggagacgccggtgcagccgtacaagatatacgaggtgtgcgagcatcctgggacagca
gacggcgccgaggatgacgaggaggagatgcccaacctgatggaccacctcaccatcaac
ccccggatcagggagccggccgccttcagccccttcgggttacccggcaacgggatgttc
ggatcctctccggtgatcccggtaccctggctctccaacggtaccctggtatcggacgtc
cccatgacctccgacctcgccgtgacctccggcctcgccatggccccggaccaccaggct
cggggtccgatggtggatccgggtagattcgcccaaccggccaaactccccgagaccctc
caggacctgaacccgctcccttcctcggcggcctcctcttcccacccgggtctggacccg
atggagaccagctccatgggcgccgcccagaaccagaccgacccccagaacaaccaaccc
tgcaagtacgacctgctgagcagcatcccattaacagatctggagctgaggttccagtac
cggggcaggtccatgggctccctgaccgtctccaacccccagggctgccggctctactat
ggccacctggagcccaccccggaccaggtggacctgttcgggcccgtatccctgcagcag
gtccggttccccggcacggccgaggtccagaaccagaagcagcggctctacacggaggcc
ctgctggacgtgatggaccggggcctgatcctggagatcgtggagcaggacatctacgcc
gtccgcctctgccagtgcaaggtgttctggtccgggccgggcctgccggaccggggccac
ggcccccccaaccccatggagcgggagcgcaagatccgggtcttcagcctcaacgacttc
ctgcaaggcctgatcctgttccagaagggcgaggccccgaacccgccccccttcgaggtt
tacttctgcttcggggaggactggcccgacaagaaacctaaagagaagaagctcatcatg
gtccaggtggttccggtcgtggcccggatcctgacggagatgttctccggggagctgagc
tggtccaccgacagcatccggctgcagatctccaacccggacgtcaaggaccggacggtg
gagcagttcaaggagctgcagcggctcctgcagagccagcagatccaggggccctggaac
cccaacgggccctga

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