Cololabis saira (Pacific saury): 133423808
Help
Entry
133423808 CDS
T09849
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133423808 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133423808 (irf5)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
133423808 (irf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
133423808
NCBI-ProteinID:
XP_061570074
LinkDB
All DBs
Position
23:complement(8382382..8397032)
Genome browser
AA seq
504 aa
AA seq
DB search
MSVQPRRIRLKPWLLLQVDGGRYPGLQWLEPEHRLFQIPWKHATRHTPVSEEENTIFKAW
AVETGKYQEGVDEPDPAKWKANLRCALNKSREFQLKYDGTKETPVQPYKIYEVCEHPGTA
DGAEDDEEEMPNLMDHLTINPRIREPAAFSPFGLPGNGMFGSSPVIPVPWLSNGTLVSDV
PMTSDLAVTSGLAMAPDHQARGPMVDPGRFAQPAKLPETLQDLNPLPSSAASSSHPGLDP
METSSMGAAQNQTDPQNNQPCKYDLLSSIPLTDLELRFQYRGRSMGSLTVSNPQGCRLYY
GHLEPTPDQVDLFGPVSLQQVRFPGTAEVQNQKQRLYTEALLDVMDRGLILEIVEQDIYA
VRLCQCKVFWSGPGLPDRGHGPPNPMERERKIRVFSLNDFLQGLILFQKGEAPNPPPFEV
YFCFGEDWPDKKPKEKKLIMVQVVPVVARILTEMFSGELSWSTDSIRLQISNPDVKDRTV
EQFKELQRLLQSQQIQGPWNPNGP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtccagccccgcaggatccggctcaagccctggctgctgctgcaggtggacggc
ggccgctacccgggcctgcagtggctcgaaccggagcaccggctcttccagatcccctgg
aaacacgccacgcgccacacgcccgtctctgaggaggagaacaccatcttcaaggcctgg
gccgtggagacggggaagtaccaggagggcgtggacgaacctgacccggccaagtggaag
gccaacctccgctgcgcgctcaacaagagccgcgagttccagctgaaatatgacggcacc
aaggagacgccggtgcagccgtacaagatatacgaggtgtgcgagcatcctgggacagca
gacggcgccgaggatgacgaggaggagatgcccaacctgatggaccacctcaccatcaac
ccccggatcagggagccggccgccttcagccccttcgggttacccggcaacgggatgttc
ggatcctctccggtgatcccggtaccctggctctccaacggtaccctggtatcggacgtc
cccatgacctccgacctcgccgtgacctccggcctcgccatggccccggaccaccaggct
cggggtccgatggtggatccgggtagattcgcccaaccggccaaactccccgagaccctc
caggacctgaacccgctcccttcctcggcggcctcctcttcccacccgggtctggacccg
atggagaccagctccatgggcgccgcccagaaccagaccgacccccagaacaaccaaccc
tgcaagtacgacctgctgagcagcatcccattaacagatctggagctgaggttccagtac
cggggcaggtccatgggctccctgaccgtctccaacccccagggctgccggctctactat
ggccacctggagcccaccccggaccaggtggacctgttcgggcccgtatccctgcagcag
gtccggttccccggcacggccgaggtccagaaccagaagcagcggctctacacggaggcc
ctgctggacgtgatggaccggggcctgatcctggagatcgtggagcaggacatctacgcc
gtccgcctctgccagtgcaaggtgttctggtccgggccgggcctgccggaccggggccac
ggcccccccaaccccatggagcgggagcgcaagatccgggtcttcagcctcaacgacttc
ctgcaaggcctgatcctgttccagaagggcgaggccccgaacccgccccccttcgaggtt
tacttctgcttcggggaggactggcccgacaagaaacctaaagagaagaagctcatcatg
gtccaggtggttccggtcgtggcccggatcctgacggagatgttctccggggagctgagc
tggtccaccgacagcatccggctgcagatctccaacccggacgtcaaggaccggacggtg
gagcagttcaaggagctgcagcggctcctgcagagccagcagatccaggggccctggaac
cccaacgggccctga
DBGET
integrated database retrieval system