Cololabis saira (Pacific saury): 133424606
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Entry
133424606 CDS
T09849
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04260
Cardiac muscle contraction
csai04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133424606
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133424606
04261 Adrenergic signaling in cardiomyocytes
133424606
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133424606
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133424606
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
133424606
NCBI-ProteinID:
XP_061571286
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Position
23:6506747..6744153
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AA seq
1105 aa
AA seq
DB search
MDYSLCVIFLLTTISSGSTGHFPTAQMIKEWVDQMQKDLITMTDTASSLDSLVQIYERHR
THFSVESNNARELVSTAAADIERLLANRSHALERLVTEAEGLQRKHVWTETSKANELFYY
NAKDGINKTVLEDKQSSEDGWDKKNRYIPDDLEFDLDFRRLVSYNATAVHIPTDIYEGST
IILNELNWTDALKDVFQRNKEEDPSLLWQVFGSATGLARYYPASPWIDTSTTRDKIDQYD
VRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIKISVSNMLETLSDDDYVNVVAFNKT
ARSAACFDNLVQANVRNKRILKDAAQNIKAEGITNYTSGFEMAFGQLAQLNVSRANCNKI
IMLFTDGGEERAQEIFERFNPKQAVRIFTFSVGQHSYDKGPIQWMACANKGYYYEIPSIG
AIRINTQEYLDVLGRPMVKADRRSRADKKAKQVQWTNVYLDALELGLVITGTLPVFNKTD
TGSKKTQNQLILGVMAIDVSLDDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPLTAR
FDEPVTLDFLDAELENDVKVEMRRKMIDGLTGDYTMSTLVKSQDERYIDQGTRMYTFAPV
KGTDYSLALVLPEYSMHYIRATIGDTITQAKFSESLLADKFDEYGYTFIAPRMYCKDLDL
PDKYTNNTEFLMDFNNYIDTKTPNNPMCNVELVNRLLLDAGITSDLIKIWKETELPDGVA
ARFVATDGGITRVYPKSAGLNWKGEAETYESSFYKRSLDNNLYIFTPTPYSDKEREPRDN
NSYYEPVSEDLILVSKAVNIMIDGIELKPAVVGVQLDVNDWMESFINTTRRMNCNDEICG
CTRNNKYIDCVIVDDGGFLVMSNQDEYITKIGDFYGVIDSVLMRTLVNATLFTSKSTYDY
QSLCDPKRESKTAAGPRSVYVPTIADILNLGWWATAATWSILQQMLVSITLPTFLDAGEI
DDDMFDAKTKEVCITEQTQYFLPNDEVSFRGSVDCENCSRLYHAEKLPETNLVFIISDAK
DTCLSCRSAPLIQEEQQSEGPDPCVMAQNPRHRKGPASCFDNNEHEKDADCGGVSGLSPS
LWLIVALQAALIWAAADCRHHAVPS
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggattactcgttatgcgtgattttcctcctgacgaccatctcgtcgggctcgaccgga
catttcccaacagcgcagatgataaaagaatgggtggaccagatgcagaaagacttgatc
acgatgacagacacagccagcagtctggacagcctggttcagatttatgaaagacacagg
actcacttcagcgtggagtccaacaacgcgagggagctggtgtcgacggcggcggccgac
atcgagagactgctggcgaaccgctcccacgccctggagaggctggtgacagaagcagag
ggtctgcagaggaagcacgtgtggacggagaccagcaaggctaatgaactcttttactac
aacgccaaagatggaataaataaaacggtactggaggacaagcaaagctctgaagacgga
tgggacaagaagaaccgatacattcctgacgatttggagttcgacctggacttcagacgg
ctcgtctcgtacaacgccacggccgtgcacatccccacggacatttacgaaggctccacc
atcattctgaacgagctgaactggacggatgcgctgaaggacgtcttccagaggaacaag
gaggaagacccgtcgctgctgtggcaggtgttcggctcggccacgggcctggcccggtac
tacccagcgtccccttggatcgacacgagcaccacacgggacaagattgatcagtacgac
gtgcgcagacgaccgtggtacattcagggggcggcgtcacccaaagacatgctgatcctg
gtggacgcgagtggaagtgtatctggtctcaccctcaaactcatcaagatctccgtgagc
aacatgctggagacgctgtccgacgacgactacgtcaacgtggtggctttcaacaagacg
gcccggtcggcggcctgcttcgataacctggtgcaggccaacgtgaggaacaagaggatc
ctcaaggacgccgcgcagaatatcaaggcggagggcatcaccaactacaccagcgggttc
gagatggcgtttgggcagctggctcagctgaacgtgtcgagagccaactgtaacaagatt
ataatgctgttcacggacggaggggaggagcgggcgcaggagatctttgagaggttcaac
cccaagcaggcggtgcgcatcttcacgttttcagtgggacagcacagctacgacaagggg
cccatacagtggatggcctgcgccaacaaaggttattactacgagatcccgtccatcggt
gccatccgcatcaacacccaggagtacctggatgtcctggggaggccgatggtcaaggcg
gacagacgctccagggccgacaagaaggccaagcaggtccaatggaccaacgtctacctg
gacgcgctggagctgggccttgtgattactggaaccctgccggtcttcaacaagaccgac
acaggctcaaagaaaactcagaaccagctcatcctgggggtcatggctattgatgtgtcc
ctggacgacatcaagaggctcactcctcgcttcacattcgggcccaacggctactacttt
gctatcgaccccaacggatacgtgctgctgcacccgaacctgcagcctctgaccgccagg
tttgacgaacccgtgacgctcgacttcctggacgcagagctggagaacgacgtcaaagtg
gagatgaggagaaagatgatcgacggcctgacgggagactacaccatgtctactctggtg
aaatctcaggacgagcgctacattgaccaaggcacgaggatgtacacctttgcccccgtg
aagggaaccgactacagcctggccctggtcctccccgagtacagcatgcactacatccga
gccacgatcggcgacaccatcacccaggccaaattttctgagagcctgctggcggacaag
tttgatgagtacggctacacgttcatcgcgccaaggatgtactgtaaggacctggatctg
cccgacaagtacacaaacaacaccgagttcctcatggactttaacaactacatcgacacc
aagactcccaacaatcccatgtgtaacgtggaactggtgaaccggctgctcctggacgcc
ggcatcacctccgacctgattaagatctggaaggagaccgagttgccggatggagtcgct
gcccgattcgttgccactgatggagggataacgcgagtttaccccaagagcgccgggctg
aactggaagggagaagcagaaacatacgagtcgagtttctacaagcgaagtttggacaat
aatctgtacatcttcactccgacgccgtacagcgacaaagagagggagccgagggacaac
aacagctactacgagccagtgagtgaagacttgatcctggtgagtaaagctgtgaacatc
atgatcgacggcatcgagctcaagccagctgtggtcggagtgcagttggacgtcaacgac
tggatggagagcttcatcaacaccaccaggaggatgaattgcaatgatgagatctgcggc
tgcacgaggaacaacaagtacatcgactgcgtcattgtggatgacgggggattcctggtg
atgtccaaccaagacgagtacataactaagatcggggatttctacggcgtcatcgactcg
gtcctcatgaggacgctggtcaacgcgaccctgttcacctccaagagcacctacgactac
cagtcgctgtgcgaccccaagagggagagcaagacggcggccgggccgcgctccgtctac
gtgcccactattgcagacatactgaatttaggatggtgggcgacagctgcgacctggtca
atactgcagcagatgctggtcagcatcactttacccacttttctggatgcaggtgaaatt
gacgatgacatgtttgatgcgaagacgaaggaagtttgcatcacggagcaaactcagtac
ttccttccaaatgacgaggtttctttcagaggctcggtggactgtgaaaactgctccagg
ctctaccacgctgaaaagctgcccgagacgaacctggtctttatcatctctgatgcgaaa
gacacctgcttatcttgtcgctcggcgccgctgatacaggaggagcagcagtctgaaggg
cccgacccctgtgtcatggctcaaaacccccgccaccggaaggggcctgcaagctgtttt
gataacaatgaacacgagaaggacgccgactgtggcggcgtgtccggcctgagcccatcg
ctctggctcatcgtggcccttcaggcggcgctgatctgggcggcggccgactgcagacac
cacgccgtcccgtcatga
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