Cololabis saira (Pacific saury): 133440663
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Entry
133440663 CDS
T09849
Symbol
tlr18
Name
(RefSeq) toll-like receptor 18
KO
K10159
toll-like receptor 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04145
Phagosome
csai04620
Toll-like receptor signaling pathway
csai05132
Salmonella infection
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133440663 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
133440663 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133440663 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
133440663 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133440663 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133440663 (tlr18)
04054 Pattern recognition receptors [BR:
csai04054
]
133440663 (tlr18)
04090 CD molecules [BR:
csai04090
]
133440663 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133440663 (tlr18)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Phagocytosis
Toll-like receptors
133440663 (tlr18)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of breast milk
133440663 (tlr18)
Pattern recognition receptors [BR:
csai04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
133440663 (tlr18)
CD molecules [BR:
csai04090
]
Proteins
133440663 (tlr18)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Hyaluronan
Cell surface receptors
133440663 (tlr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
S_100
EF-hand_7
LRR_9
EF-hand_1
LRR_5
EF-hand_8
EF-hand_6
EF-hand_5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
133440663
NCBI-ProteinID:
XP_061573970
LinkDB
All DBs
Position
3:42905163..42920729
Genome browser
AA seq
1043 aa
AA seq
DB search
MKICFLIHLSLLFIGAAASPTPPLPPTTPTEDGPCRIYNSGRSADCRGKLLDSVPQRQLP
PTLDTIDLSYNKLQVVSDTDFHHLPQLRVLQLQYNNISHIHNDAFKNNTLLEYLDIFNNS
LQYIPAAALTPLLELKNLFMSNNLYKHATLADSFSKLVKLQVLSMGGPLVMGLKRDDFQP
LKNIKLQGFAIKCSSNLSYYEPGSLKTIQTHQMGFDMAIDRLPDALHHMLHDLANKTFAV
IQFRNLFEFEYYVRNDDIFQDLRYVTAHQLIFHRGKFNENLLRMALLNMQANLIKRLRLQ
YIDFARSPTFIDSGAGSSITNLALDKLDLWYISNPDVLRFDWRFTWLKRVKELSIRFVYF
NSAPCDSWAEMEGVETLDVSNNRLKNDYIFNQRCDYRGSMPSLRVFNLSTNELTSLRDVS
SLTREFRQLQVLDLSSNKLMSVEENQECVWTQNITRFIVSDNPLTSKAFGCLPTSVRYLD
LSYCNLDQLDMAFFKKATNLEHLLLSGNKIKFIPLKWESPSLRFLALDGNSFGLISMESF
QHMPQLSELRAGNNPYHCICELHVFVQNTISKQKVNLTDWPLNYRCYHPEPFVNTLISNY
LPAQLACDIRLVIITSVAVTTVVILIFVLICYIFDLPWYTKATYQIIRAKYRAHKEKAAG
ELETFTYHAFISYSHSDADWVREQLLPCLENNRNPYRLCIHERDFMPGKWIIDNIIENIE
SSRKVIFVLSRHFVNSEWCNYELYFAQQRAMGKTFSDVILVVKEPIDPSSLPSKYCKLKK
MLSTKTYLEWPQQPNQQHFFWAQLRSVLGKPTMTRDRANSVRSMNSSVGRMSVIAPRVEE
MMPEEAVPDANKKAEPEKDIIDRYDFEVSGQAQIHAVELYYMALHGLTWPCSGSPVRGRS
LSDPCVCSQVTEPRYNGGGERRSCSLSTLSIRQCQRVQSQQGKMSANLQGVMEDLIKVFY
RYSGKEGDKYKLNKRELKQMFQAEFAEGLADPIESSEVDKIMKDLDANKDGEVDFQEFII
LVAALTVACNDFFLDLVKNSKKN
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttgttttttgattcatctaagccttctctttattggagctgctgcatcccca
actccacctttaccccccaccactcccactgaggacggaccctgtcggatctacaactct
ggccgttctgcagactgtcgtggaaaactgctggacagcgtcccgcaaagacaactccca
cctacacttgataccatagatctctcctacaataaacttcaagttgtctctgataccgac
ttccaccacctccctcagctccgcgtccttcagctgcaatacaacaacatatcacacatt
cacaacgatgcttttaaaaataatactctactggagtatctggacatttttaataactcc
ctgcagtacattcctgcagcagctctgacaccactgttggaactaaaaaacctctttatg
tccaataatctgtacaaacatgccactctggctgatagcttctccaaattggtcaaactc
caggttctgtccatgggtggccctttggtgatgggtttaaaaagagatgatttccagccc
ttaaagaacatcaagttgcaaggttttgctatcaaatgttcctccaatctgagttattat
gaacctgggagtttaaaaaccatccagacccatcagatgggctttgacatggctatagat
cgactgccggacgctcttcatcacatgctgcatgacctggccaacaaaacattcgccgtt
attcagtttcgcaacctctttgaattcgaatactatgtgagaaatgatgacattttccaa
gatttaagatacgttacagcccatcagctcatctttcacagaggcaaattcaatgagaat
ctcctgaggatggctttactgaacatgcaagcaaacctgatcaagaggctgagacttcag
tacattgactttgcccgttcaccaacatttattgacagcggagcaggttccagcatcaca
aacctggcactggataagctggatctttggtacatcagcaatccagatgtgctgcgtttc
gactggcgcttcacctggttaaaaagagtcaaggaactgtctattcggttcgtgtatttc
aactctgcaccttgtgattcctgggctgagatggaaggtgtggagactttggatgtctcc
aacaatcgcctgaagaatgactatattttcaaccagaggtgtgattacagaggcagcatg
ccaagtctgcgcgtcttcaacctaagcaccaacgagctgaccagcttaagagacgtgtct
tctctaaccagggagttcaggcagctacaggtgttggatctcagctccaacaaactaatg
tccgtagaagaaaaccaagagtgtgtttggacgcaaaacatcactcgttttattgtttcc
gacaatccgttgacgagcaaagccttcggttgtctgcccacctcagtgcgctacttggat
ctctcctactgcaacctggaccagctggacatggcgttctttaagaaagccaccaacttg
gaacacctcctgctgagtggaaacaagattaagttcatcccgttgaagtgggagagtccg
tcactgcggtttctagctctggatgggaattcttttggcctgattagtatggaatccttc
cagcatatgccgcaattatccgagctaagagctggaaacaatccttaccattgcatctgt
gagcttcatgtgttcgttcaaaacacaatatcaaaacaaaaggttaatctcacagactgg
cctttgaattacagatgttatcaccccgagccctttgtcaacacacttatatcgaactac
ctccccgctcagctagcctgcgacatccgactcgtcatcatcaccagcgttgccgtcact
acggtcgtcatcctgatatttgtgctgatttgctatatttttgacctcccttggtacact
aaggccacataccagataatcagagccaaatacagagctcacaaggagaaagcagcgggg
gaactggagacgttcacctaccacgccttcatatcctacagccactcggacgctgactgg
gtcagggagcagctcctgccctgcttagagaacaacaggaacccctaccggctgtgcatt
catgagcgcgacttcatgcctggaaagtggatcatcgacaacatcattgagaacattgaa
agcagtcgtaaggtcattttcgtcctctctcgtcacttcgtcaacagtgagtggtgcaac
tacgagctttactttgctcagcagagagcgatggggaagaccttcagtgacgtcatcctg
gtggtgaaggagcccatcgatcccagctccttgcccagcaagtactgcaagctgaagaag
atgctcagtaccaagacgtacctggagtggccccagcagcccaatcaacagcatttcttc
tgggcgcaattaaggagcgtcctggggaaaccaacaatgacacgggacagagcgaacagt
gtgaggagcatgaattcctctgtgggaaggatgtctgtgattgcaccccgagtagaagaa
atgatgccagaagaagccgtacctgacgcaaacaaaaaagcagaacctgaaaaagacata
attgacagatatgactttgaagtgtctggtcaagcacaaattcatgcagtggaactttat
tacatggccttacatggccttacatggccctgcagcggctcacctgtccgggggaggagc
ttatctgatccctgtgtttgctcacaggtgacagaaccccgatataacggaggaggagag
agacggagctgcagcctctccacactcagcatccgtcagtgtcagcgagtccagtcccag
caaggcaaaatgagtgccaatctgcaaggagtgatggaagacctcatcaaggtgttctac
cgctactctggaaaagagggggacaagtacaagctgaacaagagagaactgaagcagatg
ttccaggcggagtttgcagaaggccttgctgatccgattgagtcgtctgaggtcgacaag
atcatgaaggacctggatgcaaacaaggacggggaagtggattttcaggagttcatcatc
ctggtggctgcactcaccgtcgcctgcaatgacttctttttggaccttgtgaagaacagc
aagaaaaactaa
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integrated database retrieval system
