Cololabis saira (Pacific saury): 133440940
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Entry
133440940 CDS
T09849
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11B-like
KO
K05148
tumor necrosis factor receptor superfamily member 11B
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
csai04050
]
133440940
Cytokine receptors [BR:
csai04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
133440940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_TNFRSF11B
TNFR_c6
Death
Motif
Other DBs
NCBI-GeneID:
133440940
NCBI-ProteinID:
XP_061574266
LinkDB
All DBs
Position
3:20271935..20290750
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AA seq
417 aa
AA seq
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MSTRTVTSNPAMKLMLLFTASLSWAFQPQAVPPKYQYRDPLTSDLLFCDQCPPGTAVKRH
CTADTPTECQPCPERHFAENWHWGDTCQYCTSVCKERQLVKQQCNSTHDQLCECAPGFHL
VVEFCIAHVTCLPGYGVTALGTPVSDTVCEGCPDGYFSTGGTSTEPCRPHKSCSELGLKT
LRWGTSTSDSLCGSKEKPTLECFQHPTVCHNDVTLCEDAVFQSLASLQLSSVPLERLLES
LPGQRVDHKSLERLKKSCSPQQQVLQLLRLWKEQNKDQDKLYGIIQGVNHCERKVSRCNN
LRNLTVDDLMKVTNSLPGIRVQEVDVQAVVSTCLPRQYILQVLHLWKAANYNLDVAKGLS
HSLRVLRSQGAPRYLLKGLKKISRIIGTTSARKMYEKMFVNMLQDESCFKAHKPLNE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcacacggacagtgacatccaacccggccatgaaactaatgttgctcttcactgca
tcactttcctgggcctttcagccgcaagctgtgccaccaaagtaccaatatcgagaccct
ctgacgtccgaccttttattttgcgaccagtgcccacccggcacagccgtgaaacgacac
tgcaccgcagatacgcccactgagtgccagccctgcccagagaggcattttgctgagaac
tggcattggggagacacgtgccaatattgtacttcggtgtgcaaagagagacaactagtg
aagcagcagtgcaacagcacacacgaccagctgtgtgagtgtgctccaggtttccacctc
gtagtggaattctgcattgcacatgttacctgtctgccgggctatggagtgacagcttta
ggtacaccggtgagtgacactgtctgtgagggctgtcccgacggttatttctccacaggt
ggtacgtccaccgagccatgtcgaccccataaaagctgctcagagttgggactgaagacc
ctgaggtggggcacgtctacttcagacagcctctgtggctcgaaggagaagccaacactc
gagtgctttcagcatcctactgtgtgccataatgatgtgactctgtgtgaggatgcggtc
ttccagtcgttagcctcgctgcaactttcctcagtgcccctggagcgactgctggagagt
cttcctggacagagggtggaccacaaaagcctggaaagactgaagaagtcctgctcaccc
cagcagcaggtgctgcagctgctgcggctgtggaaggagcaaaacaaggaccaggacaaa
ttgtatggcattatacaaggtgtgaaccactgtgagagaaaggtctcccgctgcaacaat
ctaagaaacctgaccgtcgatgacctcatgaaggtaaccaacagcctcccggggatcaga
gttcaggaggtggatgtgcaggccgttgtctctacctgcctgcccaggcagtacatcctg
caggttctccacctctggaaagcagcaaactacaacctggatgtagctaaaggtctatct
cacagtctgagggtgctgcgcagccagggagcaccacgctacctgctgaaagggctcaag
aagatcagcaggatcataggaaccacctcggcacgcaagatgtatgagaagatgtttgtt
aacatgcttcaggatgagtcatgttttaaagctcataagccattaaatgagtaa
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