Cololabis saira (Pacific saury): 133441006
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Entry
133441006 CDS
T09849
Name
(RefSeq) RLA class II histocompatibility antigen, DP alpha-1 chain-like
KO
K06752
MHC class II antigen
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04145
Phagosome
csai04514
Cell adhesion molecules
csai04672
Intestinal immune network for IgA production
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133441006
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133441006
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
133441006
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133441006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133441006
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133441006
Exosomal proteins of epithelial cells
133441006
Exosomal proteins of breast milk
133441006
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
MHC_II_alpha
Ig_2
Motif
Other DBs
NCBI-GeneID:
133441006
NCBI-ProteinID:
XP_061574354
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All DBs
Position
3:complement(25729488..25732261)
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AA seq
248 aa
AA seq
DB search
MTRCSELKCSAVIILTFNIFCTVSQNAQVLDYFVGCFENGTVEVQLELNSQEIFYVDFDK
ETVEYTGPPFSKFDPSLIFNHLHLYSNAKRNKNACLAAAPLVAIETGHPPEERDPPESVL
YTAEEAELGVKNSLICFANNFYPPLIKINWTKNGNPVTEGVSLSRYYPNEDHTFHQFSTL
MFTPSETDFYKCIVEHSALKMPETKIWEPKFSPQTPEALGLDVFCGLGLTVGVLGVAAGT
LLIVRALP
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgactcgctgctcagaactgaaatgttctgctgtcataattctgactttcaacatcttt
tgtaccgtctcacaaaatgcgcaggtacttgattattttgtgggctgctttgaaaacggc
acagtcgaggtacagttggaattgaattctcaagaaatattctatgtggattttgacaaa
gagacagttgaatacaccgggcctccattttctaagtttgacccaagcttaatatttaat
catctgcacttatacagtaatgctaagagaaacaagaatgcctgcttagcagcagcccca
ttggtagcaatagaaacaggacatccaccagaggagagagaccctcctgagagtgtcctc
tacactgcagaagaagctgagctgggagtgaaaaacagcctcatctgctttgccaataat
ttctacccgcctttaatcaaaataaactggaccaaaaatggcaacccggtgactgagggg
gtctcactcagccggtattatcccaatgaagaccacaccttccaccagttctccaccctg
atgttcactccaagtgagacagatttttacaaatgcattgtggagcattcagcactgaag
atgcctgaaacgaagatctgggaacccaaattttctcctcaaactcctgaagctcttgga
ctggatgttttctgtggcttgggcctgactgtgggcgtgttgggtgttgcagctggaaca
ttattaatagtcagagcactcccctga
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