Cololabis saira (Pacific saury): 133442136
Help
Entry
133442136 CDS
T09849
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00514
Other types of O-glycan biosynthesis
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
133442136
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133442136
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csai01003
]
133442136
Enzymes [BR:
csai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
133442136
Glycosyltransferases [BR:
csai01003
]
Glycan extension
O-Glycan
133442136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
133442136
NCBI-ProteinID:
XP_061576076
LinkDB
All DBs
Position
1:complement(28181762..28191093)
Genome browser
AA seq
377 aa
AA seq
DB search
MSTKSCENIYRVRMWKPSGGPRLPLGSAAAAATCLLLAGMLLLSGGHPAAAHPGQPPAAG
KKGADVFSAYIRRLARERRAVSGPPRSSPPPRPLERLSQADLFIAVKTTRRFHRHRLELL
LDTWISRNLQQTYVFTDGENEKLRKRMGAHLINTNCSAAHNRQALSCKMALEYDAFINSG
KKWFCHVDDDNYLNVGALLKLLSQYSHTQDVYIGRPSLERPIEATEALTTTEMRQVRFWF
ATGGAGFCLSRGLALKMKPWASDGTFMATAEHIRLPDDCTVGYIVEALLGVSLIRSPLFH
SHLENLGLVSDIHNQVTISYGTVESSRNTVNVKGPFSISEDPTRFRSVHCLLYPDTPWCP
SAWRLQHPSRDKEGGMN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgaaaagttgtgaaaacatctacagagtgagaatgtggaagcccagcggggga
ccgagactccccctcggttcagccgccgccgcggccacctgcctgctgctggcggggatg
ctgctgctctccggcggacacccggccgccgctcacccggggcagcctccggccgcgggg
aagaagggcgcggatgtcttttcggcatacattaggagacttgcccgagaaaggagggcc
gtgagcggccccccgcggagcagcccccctccacggccgctggagcgtctctcccaggcg
gacctgttcatagcggtgaagacgaccaggaggttccaccggcacagactggagctgctg
ctggacacctggatctccagaaacctgcaacagacatacgtgttcactgatggcgagaat
gagaagctgaggaaaaggatgggagctcatctgatcaacaccaactgctcagcggcacac
aatcgccaggccctgtcctgtaaaatggctctggagtacgatgcttttataaactctgga
aagaagtggttctgccacgttgatgatgataactacctgaacgtcggagccctcttgaaa
ctcctgtctcagtacagtcacacgcaggacgtctatatcggccggcccagcctcgagcgg
ccaatagaggccacggaggcactcaccaccaccgaaatgaggcaggttcgtttctggttc
gccacgggaggagcgggcttctgtctgagccgtggcctcgccctcaagatgaaaccctgg
gcaagtgacggcaccttcatggccacagctgagcacatccgcctgcctgatgactgcacc
gtcggttacatagtggaggcgctgcttggcgtcagcctcatccgctcgccgttgttccac
tctcacctggagaatctgggactggtgtcagacatacacaaccaggtcactatcagctac
ggcactgtggaaagcagcaggaatactgttaatgtgaaaggacccttctcgataagtgag
gatcccaccagattcaggtctgtccattgtctgctgtacccggacactccttggtgcccc
agtgcctggcggcttcagcacccatccagagacaaagagggagggatgaactga
DBGET
integrated database retrieval system
