Cololabis saira (Pacific saury): 133443644
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Entry
133443644 CDS
T09849
Symbol
tdg.2
Name
(RefSeq) bromodomain-containing protein DDB_G0280777 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133443644 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133443644 (tdg.2)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
133443644 (tdg.2)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133443644 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Yae1_N
Motif
Other DBs
NCBI-GeneID:
133443644
NCBI-ProteinID:
XP_061576725
LinkDB
All DBs
Position
5:1375893..1418910
Genome browser
AA seq
732 aa
AA seq
DB search
MYDRYQSSQEHPEVQQVTPQHSVDQYSVGSAEEFPDQQDPETCQEAFYQSCPGAASPYHE
HQQQEHLQQQQLLQQQQDLQQQQLQKQQQQLQKEQQQDLQQQHLQQLQKQQQHLHQQQQQ
QQEQLQKQQHQLQKEQQQHLQQQHLQQQHLQQQQQYLQQQYLQQHLQQQYLQQHIQQQQQ
LQQQQHLRQHLQQQHQLRQHLQQQEQLQQQEHLQQQQEHLRQHLQQQYLQQHLQQQQQLQ
QHLRQQQHLRQEQHLRQEQHLRQEQHLRQEQHLRQQQQEHLRQQQQEQLRQQEGLRQQEQ
LRQQEGLRQQEHLRQQQQEHLQLQQQLQELQDHQEHQDLKEDHDLQEQHELQDLQDLQDL
QQHPAAALHSPQPGQESHDQLQFPPPDPSQVKKKKKRGRPPLRQAEDGETPEDDEADAAK
KAKRTLNRFNGMSAEEVMSRTLPDVLTYDLDILIIGINPGLLSAFKGHHYPNPGNHFWKC
LFLSGLTDQQLNYAHDQSLPEKYGIGFTNMVERTTPGSKELSSKEIRDGGRQLLEKLQKY
KPLIAAFNGKGIYEIFCKETFGVKSKNLEFGLQPYKIPETQTVCYLMPSSSPRCAQFPRA
QDKVHFYIRLKELRDQMKGLAPGGEVVETRYLFDLQLAKEDAKRLAIKEEQVDPEYESCS
GLRDGLRDGLQDGLQDGLQDGLQDGLQDGLQDGLQDGLQDGLQDGLQDGLQDGLQDGLQD
GLQDGLQDGPSC
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacaggtaccagtccagccaggagcatccagaggttcagcaagtgacgccccag
cactccgtggaccagtactctgtcggctctgcagaagagttccccgaccagcaggaccca
gaaacttgccaggaggcgttttaccaaagctgccccggtgccgccagtccctaccacgag
caccagcagcaggaacatctgcagcagcagcagcttctgcagcagcagcaggatctgcag
cagcagcagctccagaagcagcagcagcagcttcagaaggagcagcagcaggatctgcag
cagcagcatctgcagcaactccagaagcagcagcagcatctgcaccagcagcagcagcag
cagcaggagcaactccagaagcagcagcaccagcttcagaaggagcagcagcagcatctg
cagcagcagcatctgcagcagcagcacctgcagcagcagcagcagtatctgcagcagcag
tatctccagcagcatctgcagcagcagtatctccagcagcacattcagcagcagcaacag
ctgcagcagcagcaacatctgcggcagcatcttcagcagcagcatcaactccggcagcat
ctgcagcagcaggagcagcttcagcagcaggagcatctgcagcagcagcaggaacatctt
cggcagcatcttcagcagcagtatctccagcagcatcttcagcagcagcaacagcttcag
cagcatctccggcagcagcagcatctgcggcaggagcagcatctccggcaggagcagcat
ctccggcaggagcagcatctgcggcaggagcagcatctgcggcagcagcaacaagaacat
ctccggcagcagcaacaagaacaacttcggcagcaggaaggtcttcggcagcaagaacaa
cttcggcagcaggaaggtcttcggcagcaggaacatctgcggcagcagcaacaggaacat
cttcagctgcagcagcagctgcaagagcttcaggatcatcaggagcatcaagatcttaag
gaggatcatgatctccaggagcaacatgagctccaggatctccaggatctccaggatctt
cagcagcatcccgcggcagccctgcactcccctcagccggggcaggagtcacacgatcag
ctccagttcccgcctcctgacccctctcaggtgaagaagaagaagaagaggggccggcct
cccctgcggcaggcggaggacggcgagacgccggaggacgacgaggccgacgccgccaag
aaagccaagagaacgctgaaccgcttcaacggcatgtctgcggaggaagtgatgagccgc
acgctgccggacgtgctgacctacgacctggacatcctcatcatcggaatcaacccagga
cttctgtcggccttcaaaggacaccattaccccaacccaggaaaccatttctggaagtgt
ctgttcctgtccggcctgacggaccagcagctcaactacgcccacgaccagagcctgccg
gagaagtacggcatcggcttcaccaacatggtggagaggacgacgcccggcagcaaggag
ctctccagtaaggagatccgagacggaggacgccagctgctggagaagctgcagaaatac
aaaccgctgatagcagcttttaacggcaaaggtatttatgaaatcttctgcaaagaaacc
ttcggcgtgaagtccaagaacctggagttcggcctgcagccctacaagatccccgagacc
cagacggtgtgctacctgatgccgtcctccagcccccgctgtgcccagttcccccgagct
caggacaaggtccacttctacatccgtctgaaggagctgcgggaccagatgaagggcctg
gcccccgggggggaggtggtggagacccggtacctgttcgacctgcagctggctaaagag
gacgccaagcggctggccatcaaggaggagcaggtggacccggagtacgagagctgcagc
gggctgcgggacgggctgcgggacgggctgcaggacgggctgcaggacgggctgcaggac
gggctgcaggacgggctgcaggacgggctgcaggacgggctgcaggacgggctgcaggac
gggctgcaggacgggctgcaggacgggctgcaggacgggctgcaggacgggctgcaggac
gggctgcaggacgggctgcaggacgggccgagctgctga
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integrated database retrieval system
