Cololabis saira (Pacific saury): 133445937
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Entry
133445937 CDS
T09849
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04081
Hormone signaling
csai04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
133445937 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133445937 (rapgef4a)
Membrane trafficking [BR:
csai04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
133445937 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
133445937
NCBI-ProteinID:
XP_061579494
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All DBs
Position
6:complement(19023807..19063830)
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AA seq
1023 aa
AA seq
DB search
MVAAHTSSRSSESADWIICLDKRPAERTSEDVDIILARLKNVKALERFQPSLLQQICLCG
FYECLEKGITLYRQGDIGTSWYAVLSGSLDVKVSVTSRYQDAVTICTLGTGTAFGESILD
NTPRHATIVTREFSELLRIEQKEFRSLWEKYHRCMAGLLAPPYGVMESSCSSDRMSDKEN
IRNNSFASVSKHPNKKSFIESPAKPHPKCMSQVPSEKILRAGKVLRNAILSKAPHMIRDR
KYHLKTYRRCCVGTELVDWQMQQSSCVHSRLQAVGMWQVLLEEGVLNHVDREMSFQDKYL
FYRFLDDEQEDAPFPSEEERKESQEELQDTLLLLSQTGPDAHMRMILRKTPSERAADDLE
IIFEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHGQDVLVLEKSLGSSRSSIHGSSASHYKYKVMAGTPEKILEHLLEMMRLDSQFTES
DSALDDFLLMHCVFIPNSQLCPALRGHYHSQASQGSEQEKLDYTLNNKRRVTRLLVHWAA
VHGNHLQEEDVAFLEEFFMAVCEDAKVLPGLRDQLTELERIVKHNAEDARSSQRKHKILL
RQFSTGDEKPQKRQPIKGNDEILFKVYCCDHTYITIRVPVAASVREVISGVADKLGSAED
LILVNLSSAGEKAIFKPNDVSVFSTLSVNGRLFACRRDQLDLLTPLSEQEGPSAGTLASF
ELMSSKDVAYHITSYDWELFHCVHELELIYHTFGRQYTKKTSVNLDLFLRRFNEIQFWVV
TEMCLCSQLSKRVQLLKKFIKIAAHCKEYKNLNAFFAVIMGLSNPAVSRLTQTWEKLPSK
FKKFYGEFENLMDPSRNHRAYRLTFAKLEPPIIPFMPLLIKDMTFTHEGNKTFVDSLVNF
EKMRMMAKTLKIVRRCRSQTFSPDSPLAGKHHPDGWTYVRQFNVIDNQRTLTQLSHGLEP
RRS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggttgcagcgcacacttcttcccgttcatcggaatctgccgactggattatttgtctg
gataaaagaccagctgagcgcacgagtgaagatgttgacatcatcctggcacgcctgaaa
aatgtcaaggccttggagagattccagcccagtttgctgcagcagatttgcctgtgtggc
ttctacgagtgtctggagaaaggcatcaccttgtatcgccagggagacatcggtaccagc
tggtatgctgtgctctccggttccctggatgtgaaagtgtctgtaacgtcacgttatcag
gatgccgttaccatatgcacgttggggaccggcacagcattcggggagtcaatcctggat
aacacccccagacacgctaccatagtcactcgagaattcagcgagctcctacgcatcgaa
cagaaggagttcaggtcgttgtgggagaaatatcaccgctgcatggctggactactcgcc
ccaccctacggcgtgatggaaagcagctgcagctcggacagaatgtcagacaaagaaaac
atcagaaacaactcgtttgcttcagtctccaaacatccaaataagaagtctttcattgaa
agtccagccaagccccaccctaaatgcatgtctcaggttccttcggagaagatcctccgc
gccgggaaggttctccgtaacgccatcctctccaaagcgccccacatgatccgagacagg
aagtaccatctgaagacatacaggcggtgctgcgtggggacagagctggtggactggcag
atgcagcagagttcatgcgtccactctcgtctccaggccgtgggcatgtggcaggtgctg
ctggaggaaggcgtcctcaaccatgtggaccgcgagatgagcttccaggacaagtacctg
ttctaccgcttcctggacgacgagcaggaggacgctcctttccccagcgaggaggagagg
aaggagagccaggaggagctgcaggacactctgctcctcctctcgcagaccgggccggac
gcacatatgaggatgatcctgaggaaaactccgtctgagagagcggcagacgacttggag
attatttttgaggagctgctccatataaaggccttatctcacctatccaccactgtgaag
cgggagctggcaggagttctcatctttgagtcccacgcgaaagcgggaacagtgttgttc
aatcaaggggaggagggaacctcatggtacataattttaaagggctccgtcaatgtggtc
atctatggaaaaggtgttgtctgcactcttcacgaaggggacgactttgggaagctggcg
ctcgtcaacgacgcccctcgcgccgcctccattgtcctgcgagaggataactgtcatttc
ctgagagtggacaaagaggactttaacaggattttgagggatgtggaggccaacacggtg
cggctgaaggagcacggtcaggatgtcctggtgctggagaagagtctcggcagcagccga
tcctccatccacggatcctctgcatctcattacaaatacaaagtaatggctgggacgccg
gagaagattttggagcaccttcttgagatgatgcgactggattctcaatttaccgagtca
gactcggccttagatgacttcttgctcatgcactgcgtcttcataccaaacagtcaactg
tgcccggcgttgaggggccactaccactcccaggcctcacagggctctgagcaggagaag
ctggactacacactcaacaacaagcgcagggtgacccgcctgctcgtgcactgggcggct
gtgcacggaaatcacctgcaggaggaggatgtagccttcctcgaggagtttttcatggcg
gtgtgtgaagatgcgaaggtgcttccgggcctcagggatcagctgacagagttggagaga
atcgtaaagcacaatgcagaagatgccaggtcgtcacagagaaagcacaaaatcctgctc
cgtcagttcagtaccggagacgaaaagcctcagaaacgtcagcctatcaaggggaatgat
gaaattctgttcaaagtctactgctgcgaccacacctacatcaccatcagggtccccgtg
gccgcctcggtcagggaggtcatcagcggcgtggccgacaagctgggctcggcggaggac
ctgatcctggtcaacctcagttcagcgggagagaaagccatcttcaaaccaaacgatgtc
tccgtcttctccacactcagcgtaaacggaagactcttcgcctgccgcagggatcagctg
gatttgttgacccctctatctgagcaggagggtccctccgcaggaacgctggccagcttt
gagttgatgagctccaaagatgtggcttaccacataacgtcctatgactgggagcttttc
cactgtgtacatgagcttgagctcatctatcacacgtttgggaggcagtacaccaagaaa
accagcgtgaacctggacttattcctgaggaggttcaatgaaattcagttttgggtggtc
acggagatgtgcctgtgctctcagctgagcaagcgggtgcagctcctaaagaagttcatc
aagatcgctgcccactgtaaagagtacaagaacctgaacgccttctttgccgtcatcatg
gggctgagcaaccctgcggtgagcaggctgacccagacctgggagaaacttcccagcaag
ttcaagaagttttacggggagtttgaaaacctgatggacccgtccaggaaccaccgggcg
taccggctgacgttcgccaaactggagcctcccatcattcctttcatgcccttgctgatc
aaagacatgacgttcacccacgagggcaacaaaacatttgtcgacagtttggtcaatttt
gagaaaatgaggatgatggctaagacactgaagatcgtgagacgctgcaggagtcagacg
ttcagtccagattccccgctggccggcaagcatcacccggacggctggacctacgttcgc
cagttcaacgtgatcgacaaccagaggacgctgactcagctctcccatggactcgagccc
cgcaggtcctga
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integrated database retrieval system
