Cololabis saira (Pacific saury): 133446011
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Entry
133446011 CDS
T09849
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2 isoform X1
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133446011 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133446011 (trpm2)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
133446011 (trpm2)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133446011 (trpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
Motif
Other DBs
NCBI-GeneID:
133446011
NCBI-ProteinID:
XP_061579657
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All DBs
Position
6:complement(22005305..22030575)
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AA seq
1473 aa
AA seq
DB search
MRDSELDSPMIHALAISATYKHLTLSPSFQRYTFSSWIKENICKKECCFYQKDLSLSLSK
REEVCKCGYSKTDHADEAITSQDFAGEAWDRHRHVREVQTDAFGDISFGGLGQKTGKYVR
VSADTSPEVLYRLLTQQWELSPPNLLISVTGGAKNFYLKAHLKTVFNRGLIKVAQTTGAW
IITGGTNTGVMKYVGQAVKDHALSSSIRSKIVAIGVGTWGVIHNREALVHKDGSFPAHYL
MDSKDQGQLSCLDNNHTHFLLVDDGTHEHYGVEIELRTLLEKCICRKHLGNKESDVTIPV
VCVVLDGGPGTLNTIYNAVLNGTPCVILEGSGRLADVIANVSALPIRQVTMALIRQLMER
YFGQECKSFIELSIIEWTKKIQDIIRMSHLLTIFRLSESSHMDVDVAILQALLKASKSVE
SPGNESWKRQLELAIAWNRVDIAETEIFTEESQWKSSDLHWAMFSALVGNKPEFVRLLLE
NGVSLRDFMQDEETLRELYNQLPSCFFQRKLAKRVRSGQGSRSTSTATGKDQKITLTHVS
DELRHLLGKFTCHIYPPSTEMNHLSMSVEDTSMSCEGGQASCQVLLKERSTEAQRDAGRD
MFLWAVVQNNKELAEIAWEQCTDCMSAALAASKILKKMANETSDSDEAQDMLKLATHYEK
HAIGVFSKCHNTDEERAKRLLVRVSPFWGKTTCLRLALEADDKSFVALSGAQAFLTQIWC
SELSVDNPVWRVLICMVVFPLIYTGFLVFRQDELYQKEAQKNKDMKMVETAAGSRKKSIN
SKDRTVCCCSCPCSQCCSCCCSRLVSLYRSPQVKFYLNIASYFAFLFLFAVVLMIDFQPT
PSAAELLLYVWLLSLVCEEFRQLFYDPDGFGFSKKAQIYISDVWNILDVLSIILFILGLT
LRLKTELFYVGKVILCIDFVVFCLRLMAIFMVSRILGPKIIIVRRMMMDMFFFMFMLSIW
VVAYGVAKQGILIHNENRLDWIIRGVVYEPYLIIFGTFPKNIDYAEFDVNSCSMNATDPL
KPKCPVLNGDQTPVFPQWITIIMLCIYLLFANILLLNLLIAIFNFTFQEVQDNTDRIWKF
QRYQLIKEYHSRPVFPPPLIIFSHLYLFIRRIVLRRPPIKHKEFKRELSQTEEEVLLSWE
ALMKDRYLQSAKQEQNQSMERCIHDTSQKVTTISERLEREEETSSAAMLNRLARLEKQVT
QSAKALQWIMDSLKSQGFSPKETQSQTSAETDESPDSFRSLSEREEYFHENARQLYYPNS
KLTRFPVPEEKVPWEVSFKSYMPTIYPSEDSVDDAAGSEPEPLHLNRNPGGRTGISGRGA
LKHLGPNLSLDLVLTRWKDSDRSVLEYLSVRDKSRGISTLPGGPVDSAGQLPETLKTSLG
EKVYEAIKGKVPEGTKVFEGYVDDCRNTDNAWVESTVINIHLDRTSKVVVDINDMVARSQ
GFLEWQVVTSKAQLGSYQRDLLRQVAALHNKKS
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgagagattctgagctggactcaccaatgattcatgctctggcgatcagtgcaacctac
aaacacctgaccctctccccttcttttcagcgttacaccttttcctcctggattaaggaa
aacatctgtaagaaggaatgctgcttttatcagaaggatcttagcttgtccttatctaaa
agagaggaagtatgcaagtgtggctactcgaagaccgatcatgcagatgaagccatcacg
tctcaggacttcgcaggggaggcatgggatagacacaggcatgtccgtgaagttcaaaca
gatgcttttggtgacataagctttggaggtttgggacaaaagacaggaaagtatgtgcga
gtgtctgcagacaccagtcccgaggtgctgtaccgcttactgacccaacagtgggaactt
tcacctcccaacttgctgatctctgtgaccggaggagccaagaacttctacctgaaggct
catctcaagactgtgttcaacagaggactcatcaaagtggctcagaccacaggcgcatgg
atcatcactggcggtaccaacacaggggtgatgaagtatgtggggcaggctgtcaaggat
catgccctgagcagctccataaggagcaaaatagtggctattggagtggggacatgggga
gtaattcacaacagggaagctttagtgcataaagatgggtcttttcctgcccattacttg
atggactctaaagatcaggggcaactgtcatgtctcgacaacaatcatacccacttcttg
ctggtggatgacgggactcacgaacactacggtgttgagatagaattacgtactcttctt
gagaaatgcatctgcaggaagcatcttggaaacaaagagagtgatgtgaccatccctgtg
gtatgtgtggttttggatggaggaccaggcacgctgaataccatctataatgctgtgtta
aatggcacgccatgtgtgatcttggaaggctctggcagactagcagatgtgatcgccaat
gtctcagcactcccaattcgccaggtcactatggccctcatccgccagttgatggaaagg
tattttggtcaagagtgtaaaagcttcatcgaactcagcatcatagagtggaccaaaaag
attcaggacatcatcaggatgtctcacctgctgacaatattcagattaagtgagagcagt
cacatggatgtggatgtagccattcttcaagcccttctcaaagcttcaaagagcgtagag
tcaccgggcaacgagtcctggaagaggcagctggagctggctatcgcctggaatcgagtg
gacatagccgagaccgagatcttcactgaggagagccagtggaagtccagcgacctgcac
tgggccatgttctctgctctggtcggcaacaagcccgagttcgtgagactgctcctggag
aacggcgtgagtttgagggatttcatgcaggatgaggaaactctgcgcgagctctacaac
cagctacccagctgcttctttcaacgcaagctggccaagcgggtccgcagtggccaaggc
agcaggagcacttcaactgcaacagggaaagaccagaaaatcaccttgacacatgtctct
gatgagctgcgccacctgctggggaaattcacctgccacatctatcccccctctaccgag
atgaaccacctcagcatgtctgtagaggacacatcgatgtcgtgtgagggtggtcaggca
tcttgtcaggttctactcaaggagcgcagcactgaagcacagagggatgcgggcagagat
atgttcctttgggctgtagtccagaacaacaaggagctggctgagattgcctgggagcag
tgtacagactgcatgtctgctgctctagctgccagtaagatcctgaagaaaatggccaac
gaaacaagtgactctgatgaggcacaagacatgctcaaactcgccactcattacgaaaag
catgcaatcggtgtgttcagtaagtgccacaacactgatgaggaacgggctaagaggctg
ttggttcgcgtgtcacccttttgggggaaaacgacgtgcctgcggctggcgctggaggct
gatgataaaagcttcgtggctctgtcaggagctcaggcttttctgactcagatctggtgt
agtgagctttcggtggacaaccccgtctggagagtgctgatctgcatggtcgtcttccct
cttatttatacaggctttttagttttcagacaagatgaactctaccagaaagaagctcag
aaaaacaaagacatgaagatggtggagacggcggcgggcagcaggaaaaaatctattaac
tccaaggacagaacggtatgttgctgctcctgtccctgctcccaatgctgctcctgttgc
tgctcccgactggtgagcttgtacaggtccccacaggtcaagttttacttgaacatcgca
tcctacttcgccttcctcttcctgtttgctgtggtgctgatgatcgacttccagcccacg
ccatctgctgcagagctgctgctctacgtctggctgctctctctggtttgcgaggagttc
aggcagttgttttatgatccggatggttttgggttttcaaagaaagcgcaaatatacatc
agtgatgtgtggaatattttagacgttctgtctatcatcctgtttattttaggccttacg
ttaagactgaaaactgagctgttctatgtgggtaaagtcatcctttgcatcgactttgtg
gtcttctgcctccgcctcatggctatcttcatggtcagtcgaatcctgggacccaaaatc
atcatagtcagaaggatgatgatggatatgttcttcttcatgtttatgctgagcatctgg
gtggtggcgtatggggtggccaaacaaggtattctcatccacaatgagaaccggctggac
tggattatccgcggggtggtttacgagccttacctcatcatatttggaacttttccaaag
aatattgattatgctgagtttgacgtgaactcctgcagcatgaatgccacagatcctctg
aagccgaagtgtcccgtgctgaatggagaccaaactccggtctttcctcagtggatcacc
atcatcatgctctgtatttacctgctctttgccaacatactgctgctcaacctgctcata
gccatctttaactttacgttccaggaagtccaggacaatacagatcggatctggaagttt
caaagatatcaattaatcaaggagtaccacagtcgcccagttttccctcctcctttgatc
atcttcagtcatctctacctgttcatcaggaggatagtgctgcggaggccccccatcaaa
cacaaagagttcaagagagaactttctcagacagaagaagaggtgcttttgtcctgggag
gcattgatgaaggacagatacctgcagtcagcaaagcaggagcagaaccagagcatggag
agatgcatccacgataccagtcaaaaggttaccaccatatccgaacggctggaaagggaa
gaggaaactagctctgctgccatgctgaacaggctggccagactagagaagcaggtcacc
cagtcagccaaagctctgcagtggattatggacagtctgaaatcgcagggtttttctcca
aaagaaacccaatcacagacctcggctgaaacagacgagtcccctgactcgttcaggagc
ctatcggagagagaggagtatttccatgaaaacgctcgtcagctttactacccgaacagc
aaactcacacggtttcctgtgccagaagaaaaagtgccctgggaggtcagcttcaaatct
tacatgcccactatttatccttctgaagatagcgttgacgacgcggctggatccgaacca
gaacccttacatcttaacagaaatccaggcggaaggacgggaatcagcggacgaggagca
ctcaaacatcttggtcccaacttgagcctggatctggtgctcacacggtggaaagatagt
gacagatcagtcctggagtacctgtctgttcgggataagagtcgaggaatctcaactcta
cctgggggacccgtcgactctgctggtcagctgccagagactcttaagacatcactgggg
gagaaggtttatgaagcaataaaaggaaaagtgcctgaaggaacaaaggtgtttgaaggt
tatgtggatgactgcaggaatacagataacgcctgggtagaatccacagtcataaacatt
cacctggacagaacaagcaaagtggtggtggacatcaacgacatggtggcgagaagccag
ggctttcttgagtggcaggtggtgaccagcaaagcccaactaggctcgtatcaaagagat
ttactgagacaggttgcagcgctccacaacaagaagtcctga
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integrated database retrieval system
