Cololabis saira (Pacific saury): 133447226
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Entry
133447226 CDS
T09849
Symbol
hmmr
Name
(RefSeq) hyaluronan mediated motility receptor isoform X1
KO
K06267
hyaluronan-mediated motility receptor
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133447226 (hmmr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
csai04090
]
133447226 (hmmr)
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133447226 (hmmr)
CD molecules [BR:
csai04090
]
Proteins
133447226 (hmmr)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Hyaluronan
Cell surface receptors
133447226 (hmmr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMMR_N
HMMR_C
Fib_alpha
ATG16
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
133447226
NCBI-ProteinID:
XP_061581787
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All DBs
Position
7:complement(37340336..37349575)
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AA seq
1030 aa
AA seq
DB search
MSFSRAPVKRFNEHIGCAPAPGSYEIRTGELKGAASFDKSDRFKPVKTAAGADLPPPSPC
RSNLVSPVRRTLSVDFLTEVSSARKERNGMTVERKQQKLLEREIRSLVQQRGEQDRRLLV
LEEEMKKVEAKLLAAVREKTAVSASVATLERQRAELKKVNEFLKNKVSADTTKKRINSLT
MELMEARNNLDVKNQEISVLQVNTEGQVKVLETDLQAARATFSALQDKNKDLEDLHEMTK
TQNEELENENASLHAVIHELREEVKALQGYLDAANDQIQDLRLKIEEQTKENTAGSEAEK
LQQLEVETTRDQLRQKEEEAQKFQQELQASKDSLWEVETRLQYQELELQAAQKSACDMEK
QVKSANQEVQDCQATVRQQEAELVRLKEVLRRTERELDERVAHLEQRCLSSEEERHKIQE
EGLRRIEELKMELSSLQQKKRDERKRQIQLEQEHAALTEELAKEKALVDSLTVLVEQERE
ESEEQMGQLKEEMEEVLGELALMEEEERRKQELAEQSQEALQKLREENGELERQLNVTKE
LLMSKTNNVDSLEGMQVAAMKELQEVHTSSQEKMGDIVTELESTAEALKAAEARQRELEA
EVERVTHQLKETMDKLVEEKKEEISRVKEWSEEQEERLLAEGRAREENERMLLEVRSCLA
QRDEAMKAAEASHAAQIHQLQQELQLQTSERLEAEKQLEEQRSHSLAQLQRKADKEQALL
QDKKEITKRLQEEREEKFKIQMALEQEKGALEVERKIREQVKTELLSLQRELESAEESRR
SLSSDVELKEQLRLALENQLSATELEKHQLRSRLYDSEQERVGLQARSVLLEEKTQALET
EVEKQEQDKRALREHTEALAQEKVALQWEMEEQRRELQTQITEAQESSSPSSEIEHWRRL
YEELFAKVRPFQEQLNAFAAERHALLNENGANQEELNKLADAYARLLGHQNQKQKIKHVV
KLKDENVDLKQEVLKLRALVSRQKCDVEQLKSQLPGASRRRFDPSKAFQHDKENRQTEAV
EPLREGNHNE
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctccagagcaccggtgaaaagatttaatgagcacattggttgtgctcccgcc
ccgggatcctacgagatcaggacgggagagctgaagggagcggcgtcttttgacaagtct
gaccgattcaaacccgtcaagacagctgctggcgctgatctgccccctccatcaccctgc
aggagcaacctggtctctcctgtccgcaggaccctgtcagttgattttcttacggaagtg
tccagtgcaaggaaagagaggaatggcatgactgtggagaggaagcagcagaagctcttg
gagagagagatccggagcctggtgcagcagcgaggggagcaggaccgtcgcttgctggtc
ttggaagaggagatgaagaaggtggaggccaagctgctggctgcagtcagggagaagacg
gctgtctctgccagtgtcgccacgctggagcgacagcgggcagagctcaagaaagtcaat
gagtttctcaaaaataaggtttcagccgacaccacaaaaaagagaatcaattctctcaca
atggagctgatggaagctaggaacaatctggatgttaaaaaccaggagataagtgtcctg
caagtcaacactgagggccaggtgaaggtgctcgaaactgatctccaggcagccagagct
actttctctgctctacaggacaagaataaagacttggaggatctccatgaaatgacaaaa
actcagaatgaagagctggaaaatgaaaatgcaagcttgcacgctgtgatacacgagctg
cgagaggaggtcaaggcacttcagggatacctggatgcagccaatgaccagatccaagat
ctccgcttgaagatcgaagagcagacaaaagagaacactgctggctctgaagcagagaag
cttcagcaattagaagttgaaaccacccgagatcagctacgacaaaaagaggaggaagct
cagaagttccagcaagagctgcaggcatccaaggactctttgtgggaggtggagacgagg
ttgcagtaccaagagctggagctccaggctgcacagaagtcagcgtgcgacatggagaag
caggtgaagtcggccaaccaggaagttcaagactgtcaggcaacagtccgtcagcaggag
gccgagctcgtcagactcaaggaggtgctgaggaggacggagagggagctggatgaaagg
gtggcacatctggagcagaggtgtctgtcctctgaggaagagagacacaagattcaggag
gaggggctgaggagaatagaggagctgaagatggagttgagctccttacaacagaagaaa
agagatgagagaaagagacagatccagcttgaacaagaacatgctgccttaacggaggag
ttggcaaaagagaaggcacttgtagattctctgactgtgttggtggagcaggagagggag
gagtctgaggagcaaatgggacagttaaaggaggagatggaggaggtgctgggagagctg
gccctcatggaggaggaggagcgaaggaagcaggagctggcggagcagagtcaggaggcc
cttcagaaactacgggaggaaaacggggagctggagcgacagctaaacgttacaaaagaa
cttctgatgagtaagaccaacaacgtggacagtctggagggaatgcaggtggctgccatg
aaagagctccaggaggtccacacctcctcccaggagaagatgggggacatcgtgacggag
ctggagagtaccgcggaggctctaaaggcagccgaagcaagacagagagagctggaagcc
gaggtggagagagtgacccaccagctgaaggagacaatggacaaattggttgaggagaaa
aaagaagaaatcagccgagtgaaggagtggtcagaggagcaggaggaacgactgctggct
gaagggagagccagggaggagaatgaaagaatgttgctggaagtgcggtcttgcctcgca
caaagagacgaggcgatgaaggccgcggaggcgagccacgcggctcaaatccatcagctc
cagcaggagctgcagctgcagacgagcgagaggctggaggccgagaagcagctggaggag
cagagaagtcacagtttagctcagctccaacgcaaggcagataaagagcaggcgctgctg
caggacaaaaaggaaattacaaaacgactccaagaagaaagggaggagaaatttaaaatt
cagatggcactcgagcaggaaaaaggagcgttggaggttgagaggaaaatccgcgagcag
gtgaagacggagcttctctctctccagcgtgagctggagagcgccgaggagagcaggaga
agtctgtcgtctgacgtggaactcaaagagcagctcagactcgctctggaaaatcaactg
agcgccaccgagctggagaaacatcagcttcggtctcgtctgtatgactccgagcaagaa
agggtcggcctccaggcccgatcggtcctcctggaggagaagacgcaggctctggagacg
gaggtggagaagcaggagcaggacaaacgggctctgagggagcacacggaggcgctggcg
caggagaaggtcgcgctgcagtgggagatggaggagcagcggcgggaactccagacacaa
atcaccgaagcacaagaaagcagctctccgagttctgagattgagcactggaggagactt
tatgaggagctttttgctaaagtcagacccttccaggagcagctgaacgcgtttgcagca
gagcgccatgccttgctcaacgagaacggagcaaaccaggaggaactaaacaaactggcc
gatgcttacgcccggctcctgggccaccagaaccagaagcaaaagatcaaacacgtggtg
aaactcaaggatgagaacgtcgacttgaaacaggaggtgttgaaactccgtgccctggtg
agccggcagaagtgcgacgtggagcagctgaagtcgcagctccccggcgcttctcgccgc
aggtttgatcccagcaaagccttccagcacgacaaggagaacaggcaaacggaggccgta
gagcctctcagggaaggaaaccataacgagtag
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