KEGG   Cololabis saira (Pacific saury): 133447604
Entry
133447604         CDS       T09849                                 
Symbol
ran
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03008  Ribosome biogenesis in eukaryotes
csai03013  Nucleocytoplasmic transport
csai03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133447604 (ran)
   03008 Ribosome biogenesis in eukaryotes
    133447604 (ran)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    133447604 (ran)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133447604 (ran)
   03009 Ribosome biogenesis [BR:csai03009]
    133447604 (ran)
   03016 Transfer RNA biogenesis [BR:csai03016]
    133447604 (ran)
   03036 Chromosome and associated proteins [BR:csai03036]
    133447604 (ran)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csai04147]
    133447604 (ran)
   04031 GTP-binding proteins [BR:csai04031]
    133447604 (ran)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     133447604 (ran)
Ribosome biogenesis [BR:csai03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    133447604 (ran)
  Pre-60S particles
    133447604 (ran)
Transfer RNA biogenesis [BR:csai03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    133447604 (ran)
Chromosome and associated proteins [BR:csai03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     133447604 (ran)
   Spindle formation proteins
    133447604 (ran)
Exosome [BR:csai04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133447604 (ran)
GTP-binding proteins [BR:csai04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    133447604 (ran)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RNA_helicase ArgoMid Pox_A32 AAA_24 TsaE AAA_7 DUF5906 DUF5935
Other DBs
NCBI-GeneID: 133447604
NCBI-ProteinID: XP_061582302
LinkDB
Position
7:complement(29392076..29395257)
AA seq 219 aa
MADSMGQCVPVAVFKLVLVGDGGTGKTTFVKRHITGEFEKKYVATLGVEVHPLMFHTNRG
PIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPI
VLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFV
AMPALAPPEVQMDPTLAAKYEEELQVASQTALPDEEDDL
NT seq 660 nt   +upstreamnt  +downstreamnt
atggctgactcaatgggacagtgtgtgccggtggctgtgttcaagcttgtgttggtagga
gatggaggcacaggaaaaactacttttgtgaagaggcatattacaggagagtttgagaag
aagtatgtagcaaccctgggagttgaagtgcacccactgatgttccacaccaacagagga
cccattaagtataatgtctgggacacagctggtcaagaaaagtttggtggtctgagagat
ggctactacattcaagctcagtgtgcgatcatcatgtttgacgtaacctctcgggtcact
tacaagaatgtgccaaactggcatcgtgacctggtgcgcgtctgtgagaacattcccatc
gttctttgcggcaacaaggtagacatcaaagacaggaaagtcaaagccaagagcatcgtg
tttcaccgcaagaagaacctgcagtactatgacatttctgccaaaagtaactacaacttc
gagaagcccttcctgtggttagcaaggaagttgattggtgatcccaacttggagtttgtg
gctatgcctgcccttgctcccccagaggtccagatggaccccacccttgccgctaaatat
gaggaagagcttcaagttgcatcacagacagcactcccagatgaagaagatgacctctaa

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