KEGG   Cololabis saira (Pacific saury): 133448383
Entry
133448383         CDS       T09849                                 
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
  KO
K10387  plakophilin 1
Organism
csai  Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:csai00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csai04812]
    133448383 (pkp1b)
Cytoskeleton proteins [BR:csai04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filament-binding proteins
    133448383 (pkp1b)
SSDB
Motif
Pfam: Arm ARM_ARMC5 ZER1-like_2nd Atx10homo_assoc Ish1
Other DBs
NCBI-GeneID: 133448383
NCBI-ProteinID: XP_061582827
LinkDB
Position
8:14829025..14840863
AA seq 721 aa
MTSADPLKTVISIGNVDDTSLALPSLNQYRSGQQRVMEQVRTIRRTKSRPSSSRSASGAS
ASLSPTSPSYDPVFLEKSSTSNGNVFFVNGVSKNFGVDKTVSRPIVNNSQRSSVSRHSTY
YHERDYAPFTSCAVAQNRSSRSEPDLGWRFSVPQPSLPPQRIVSNQETYLKKRSTSQFIT
NTMSKPQVPVANGSNLTKSNSQFLCSRADRSKTSSRPSITEATPKTGINGNGGVTDITMK
EAVEFLSSEDEKYQFCGASYIQHNTFLQDKAKEEVLQLNGIPPLVALLHASSSQVSQTAT
AALRNLAFKNDKNKEEIRRCGGITEAVAQLRDSDSLELHKQLTGLLWNLSSADNLRPDLL
KIALPALVERVILPYTATPKRSNDKSRDPDVFFHTTGCLKNLSSAKQSSRQAMRKCRGLV
DSLVSYIKDRVDAEKPDDESVENCMCILHNLTFQLEAEAPALFSRITALAKTVIKNQGES
NASPVGCFSAQSKVSETERHFDFPVVEDPHPTGAGWLIHSKTLQSYLSLLGSSQREETQE
VCCGTLLNLTAHEGIVPSVMSQIIVQKLNGLPVITPLIKSDKVNLQKSAVGLLGNLTKNP
NLHSAIARKSLPPLLGLLGEGTKEGNESDDTLAMACQSASSLLMKEPEMSKTLLTNNLVK
SLNDLSQNIYFPKSRKAAALLLYKIWSDKDLQSFLKKQGMNKSSFVNDITVAAQRSAQVV
E
NT seq 2166 nt   +upstreamnt  +downstreamnt
atgacgagcgcggacccgctgaaaacggtcatttccatcgggaatgtggacgacacgtct
ctggccctgccgtccttgaaccagtaccggtccggacagcagcgcgtcatggagcaagtg
cggaccatccgcaggaccaagtcccggccgtccagcagcaggagcgcatccggcgcgtcc
gcgtctctgtcccccacaagcccttcgtacgatcctgtgttcctagagaagtcaagcaca
tcaaatggaaatgtcttcttcgtcaatggagtctctaaaaatttcggcgtagataagact
gtttcccgaccgatagtcaacaactcccaacgatccagtgtgagcagacactcgacctac
taccatgagagggattacgctcctttcacctcatgtgcggttgctcagaaccgcagcagc
cgcagcgagcctgatctggggtggcgcttctccgtaccacagccttctctcccaccacag
agaatcgtctccaatcaggagacctacctgaagaaaaggagcaccagtcagttcataaca
aacaccatgtccaagcctcaggtgcctgttgcaaatggctccaatctgaccaaatccaac
agccagttcttatgcagtcgagccgacaggagcaaaacaagctccaggccttccatcacc
gaggcaacgcccaagaccgggataaatggaaacggtggagtcactgatatcactatgaag
gaggctgtggagtttctttccagcgaggatgagaaatatcagttctgtggagcttcgtac
atccaacacaacacgttccttcaggacaaagcaaaagaggaggtgttgcagttaaatggc
atcccgccgctggtggctctgcttcacgcctccagctcccaggtcagccaaacagccacc
gctgccctccggaacctggcctttaaaaacgacaaaaacaaagaggagatacgtcgctgt
gggggcattacagaagctgtggctcagctcagagattccgactctttggagctgcacaaa
cagcttacaggtcttttgtggaatttgtcctctgcagacaacctgaggccggacctgttg
aagatcgctctgccagcgttggtggagcgtgtaatcctgccttacacagcgactcctaag
cggagcaacgataaaagcagagaccccgatgtcttctttcacaccacaggatgtcttaaa
aacctcagcagtgcaaaacaaagcagccgacaggcgatgaggaaatgccggggcttggtc
gactctttagtcagttacatcaaagaccgggtggatgcagaaaaacctgatgatgagtct
gtggaaaactgcatgtgcatcctgcacaacctcacgttccagctggaggccgaggctccg
gcgctattcagcagaatcacggctctggccaagacggttatcaagaaccagggtgaaagc
aacgccagtcccgtcggctgcttcagtgcacagagcaaagtctcagagactgagcgtcac
tttgacttcccggttgtggaagacccacatcccaccggggccggctggttgatccactcc
aaaacgctgcagagttacctgtcgctgctcggctccagccagcgagaagaaacacaggaa
gtctgctgtgggacgctgctgaatctcaccgcacacgaaggcattgtccccagtgtaatg
agccagatcattgttcagaaactgaatggcctgcccgtcatcaccccgcttataaagtca
gacaaagtcaacttgcagaagagcgctgtgggattgctcggaaacttgactaagaacccg
aacctgcacagtgcaattgctcgaaaatccctcccaccgttgcttggcctcctcggcgaa
ggcacaaaggaagggaatgagtcagatgacaccctggccatggcgtgccagtccgccagc
tctctgcttatgaaggagcccgagatgagcaagacgttgttgaccaacaatctcgtaaaa
tcactgaatgacctcagccaaaacatatatttccccaaatcccgcaaagctgcagccctt
cttctctacaaaatctggtcagacaaagatttacaaagctttctaaaaaagcaagggatg
aacaagtcctcattcgtcaatgacattaccgtggcggcacagcggtcggctcaagtggtt
gagtaa

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