Cololabis saira (Pacific saury): 133448383
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Entry
133448383 CDS
T09849
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133448383 (pkp1b)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
133448383 (pkp1b)
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Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Atx10homo_assoc
Ish1
Motif
Other DBs
NCBI-GeneID:
133448383
NCBI-ProteinID:
XP_061582827
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All DBs
Position
8:14829025..14840863
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AA seq
721 aa
AA seq
DB search
MTSADPLKTVISIGNVDDTSLALPSLNQYRSGQQRVMEQVRTIRRTKSRPSSSRSASGAS
ASLSPTSPSYDPVFLEKSSTSNGNVFFVNGVSKNFGVDKTVSRPIVNNSQRSSVSRHSTY
YHERDYAPFTSCAVAQNRSSRSEPDLGWRFSVPQPSLPPQRIVSNQETYLKKRSTSQFIT
NTMSKPQVPVANGSNLTKSNSQFLCSRADRSKTSSRPSITEATPKTGINGNGGVTDITMK
EAVEFLSSEDEKYQFCGASYIQHNTFLQDKAKEEVLQLNGIPPLVALLHASSSQVSQTAT
AALRNLAFKNDKNKEEIRRCGGITEAVAQLRDSDSLELHKQLTGLLWNLSSADNLRPDLL
KIALPALVERVILPYTATPKRSNDKSRDPDVFFHTTGCLKNLSSAKQSSRQAMRKCRGLV
DSLVSYIKDRVDAEKPDDESVENCMCILHNLTFQLEAEAPALFSRITALAKTVIKNQGES
NASPVGCFSAQSKVSETERHFDFPVVEDPHPTGAGWLIHSKTLQSYLSLLGSSQREETQE
VCCGTLLNLTAHEGIVPSVMSQIIVQKLNGLPVITPLIKSDKVNLQKSAVGLLGNLTKNP
NLHSAIARKSLPPLLGLLGEGTKEGNESDDTLAMACQSASSLLMKEPEMSKTLLTNNLVK
SLNDLSQNIYFPKSRKAAALLLYKIWSDKDLQSFLKKQGMNKSSFVNDITVAAQRSAQVV
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgcggacccgctgaaaacggtcatttccatcgggaatgtggacgacacgtct
ctggccctgccgtccttgaaccagtaccggtccggacagcagcgcgtcatggagcaagtg
cggaccatccgcaggaccaagtcccggccgtccagcagcaggagcgcatccggcgcgtcc
gcgtctctgtcccccacaagcccttcgtacgatcctgtgttcctagagaagtcaagcaca
tcaaatggaaatgtcttcttcgtcaatggagtctctaaaaatttcggcgtagataagact
gtttcccgaccgatagtcaacaactcccaacgatccagtgtgagcagacactcgacctac
taccatgagagggattacgctcctttcacctcatgtgcggttgctcagaaccgcagcagc
cgcagcgagcctgatctggggtggcgcttctccgtaccacagccttctctcccaccacag
agaatcgtctccaatcaggagacctacctgaagaaaaggagcaccagtcagttcataaca
aacaccatgtccaagcctcaggtgcctgttgcaaatggctccaatctgaccaaatccaac
agccagttcttatgcagtcgagccgacaggagcaaaacaagctccaggccttccatcacc
gaggcaacgcccaagaccgggataaatggaaacggtggagtcactgatatcactatgaag
gaggctgtggagtttctttccagcgaggatgagaaatatcagttctgtggagcttcgtac
atccaacacaacacgttccttcaggacaaagcaaaagaggaggtgttgcagttaaatggc
atcccgccgctggtggctctgcttcacgcctccagctcccaggtcagccaaacagccacc
gctgccctccggaacctggcctttaaaaacgacaaaaacaaagaggagatacgtcgctgt
gggggcattacagaagctgtggctcagctcagagattccgactctttggagctgcacaaa
cagcttacaggtcttttgtggaatttgtcctctgcagacaacctgaggccggacctgttg
aagatcgctctgccagcgttggtggagcgtgtaatcctgccttacacagcgactcctaag
cggagcaacgataaaagcagagaccccgatgtcttctttcacaccacaggatgtcttaaa
aacctcagcagtgcaaaacaaagcagccgacaggcgatgaggaaatgccggggcttggtc
gactctttagtcagttacatcaaagaccgggtggatgcagaaaaacctgatgatgagtct
gtggaaaactgcatgtgcatcctgcacaacctcacgttccagctggaggccgaggctccg
gcgctattcagcagaatcacggctctggccaagacggttatcaagaaccagggtgaaagc
aacgccagtcccgtcggctgcttcagtgcacagagcaaagtctcagagactgagcgtcac
tttgacttcccggttgtggaagacccacatcccaccggggccggctggttgatccactcc
aaaacgctgcagagttacctgtcgctgctcggctccagccagcgagaagaaacacaggaa
gtctgctgtgggacgctgctgaatctcaccgcacacgaaggcattgtccccagtgtaatg
agccagatcattgttcagaaactgaatggcctgcccgtcatcaccccgcttataaagtca
gacaaagtcaacttgcagaagagcgctgtgggattgctcggaaacttgactaagaacccg
aacctgcacagtgcaattgctcgaaaatccctcccaccgttgcttggcctcctcggcgaa
ggcacaaaggaagggaatgagtcagatgacaccctggccatggcgtgccagtccgccagc
tctctgcttatgaaggagcccgagatgagcaagacgttgttgaccaacaatctcgtaaaa
tcactgaatgacctcagccaaaacatatatttccccaaatcccgcaaagctgcagccctt
cttctctacaaaatctggtcagacaaagatttacaaagctttctaaaaaagcaagggatg
aacaagtcctcattcgtcaatgacattaccgtggcggcacagcggtcggctcaagtggtt
gagtaa
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