Cololabis saira (Pacific saury): 133450814
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Entry
133450814 CDS
T09849
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04137
Mitophagy - animal
csai04141
Protein processing in endoplasmic reticulum
csai04210
Apoptosis
csai04217
Necroptosis
csai04621
NOD-like receptor signaling pathway
csai04622
RIG-I-like receptor signaling pathway
csai04920
Adipocytokine signaling pathway
csai05132
Salmonella infection
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133450814
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133450814
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133450814
09143 Cell growth and death
04210 Apoptosis
133450814
04217 Necroptosis
133450814
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133450814
04622 RIG-I-like receptor signaling pathway
133450814
09152 Endocrine system
04920 Adipocytokine signaling pathway
133450814
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133450814
09171 Infectious disease: bacterial
05132 Salmonella infection
133450814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133450814
04121 Ubiquitin system [BR:
csai04121
]
133450814
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133450814
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
133450814
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
133450814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_4
Sina_ZnF
zf-C3HC4_4
zf-RING_5
zf-RING_6
MATH
BLOC1_2
TRAFD1-XIAF1_ZnF
zf_C2HC_14
Motif
Other DBs
NCBI-GeneID:
133450814
NCBI-ProteinID:
XP_061585699
LinkDB
All DBs
Position
9:48228656..48264353
Genome browser
AA seq
604 aa
AA seq
DB search
MAAQEQSPASSLEDNKPGFPKKILANNLEDKHLCNSCQKILRRPLQAQCGHRFCSFCFSR
IVSAGPQKCSACIKEDLFEEPTSILKQGGAFPDNAARREVEALAAVCPNEGCTWMGTIKD
FEANHEGTCDFMIIMCPSCKELMRANEQERHNERECPERTLNCKYCKEPFLLKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVEHIKFCSKFKAPCRFHVVGCDTSVEKENIHDHERQCS
YEHLNLLLHFIMGIKVSLDSLQPQSLEVASQRLQDLHQSLRELELKMSQLGGGGPAPIQG
GGGPAPVQGGGGPAPVQGGGGPAPVQGGGGLAPVQGACGPTLATSFTPLPSAMRAALELQ
LQMEKTKVAELCRCCQELELKVSTFENIVCVLNREMEHSCTTMEAYNRQHRLDQDKIEIL
NNKVRQLERTVSLRDLSIVEMEGKIREMSAATYDGIFIWKIPDFIKKRQDAVAGRAPAMF
SPAFYTSKYGYKMCLRIYSNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQ
NNREHIIDAFRPDVSSSSFQRPVSDMNIASGCPLFCPLAKLDSKNSYIRDDTIFIKAIVD
LTGL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaggagcagagtccagcatcatccctggaagacaacaaaccgggctttcca
aagaaaattctggccaacaatcttgaagacaagcatttgtgcaactcgtgtcagaaaatc
ctgcgaagaccattgcaagcccaatgcggtcaccgcttttgttcgttttgtttcagcaga
atcgtgagtgctggaccacagaaatgcagtgcttgcatcaaagaagacttgtttgaagag
cccacctcaattctcaagcaaggtggtgctttcccagacaatgcagctcgaagagaagtg
gaagccttggcagcagtctgccctaatgaaggatgcacatggatgggcactatcaaagac
tttgaggccaaccatgagggcacctgtgacttcatgatcatcatgtgtccttcctgtaaa
gaactgatgagagccaatgaacaggaacgccacaatgagagagaatgtccagagaggaca
ctgaactgcaaatactgcaaagaacccttccttttaaagaacataaaggctcatgatgaa
atctgtccaaagtacccgatgatttgtgagggctgtgcgaagaaaaagatccccagagaa
aagtatgtggagcatattaagttctgcagtaaatttaaagcaccatgcagatttcatgtt
gttggctgcgatacgtctgtggagaaagagaatatccatgaccatgagcggcagtgttcg
tatgagcacctcaacctacttctgcatttcatcatggggatcaaggtgagtctggacagc
ctgcagccccagagcctggaggtggccagccaaaggttgcaggatctgcaccaatccctc
agggaactggagctgaagatgagccagttgggtggaggtggcccagcacccattcagggc
gggggtggccctgcacccgttcagggcgggggtggccctgcacccgttcagggcgggggt
ggccctgcacccgttcagggcgggggtggccttgcacctgttcagggggcgtgcggccca
actctggccacctctttcaccccgctacccagtgccatgcgtgctgctctggagctccaa
ctccagatggaaaagaccaaggtggctgagctgtgcaggtgctgccaggagttggagctc
aaagtgagcacatttgaaaacattgtctgtgtccttaaccgggagatggagcactcgtgc
accaccatggaggcctacaaccgacaacatcgactagaccaggacaagattgagatcctc
aacaacaaggttcgtcaactggaaaggacggttagcctgagggacctgtccatcgtggag
atggagggaaaaattagagaaatgtctgcagcaacctatgatggcatctttatctggaaa
atcccagatttcatcaagaagaggcaggacgctgttgctgggcgcgctcctgctatgttc
tctcctgcattttatactagtaaatacggctacaagatgtgcttgcggatctactcgaac
ggtgacgggacgggacgtggcacccacctgtctctgttttttgttgtgatgagaggacac
agcgacgcactcctcaagtggccctttaatcaaaaggttaccctcatgctgctcgaccag
aacaacagggagcacataattgatgcgttccggccagacgtctcctcatcatcctttcag
aggccggttagtgacatgaacatcgccagtggctgtccgctcttctgtcctcttgccaag
ctggactctaaaaactcctacatacgtgacgacaccatcttcatcaaggctattgtagac
ctcactgggttatag
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