Cololabis saira (Pacific saury): 133452480
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Entry
133452480 CDS
T09849
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133452480 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133452480 (nthl1)
Enzymes [BR:
csai01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
133452480 (nthl1)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133452480 (nthl1)
Prokaryotic type
133452480 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
133452480
NCBI-ProteinID:
XP_061587806
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All DBs
Position
1:complement(33021827..33026857)
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AA seq
423 aa
AA seq
DB search
MSTSMFLLVCCGTRVFHAVPGFTMNSPYFVQTCRSVVTRSGAGAAGGAAAGSLRSKLTRS
AGVGAAVPPVEVKVEAEEPKVSSVPSTTTGSCNEVIQQATVLMKTETVVLQNSPRGHKRT
HLKVEYDRNDGVSSVKTEHWEPLNWKKPLELIREMRSSRDAPVDNMGAEKCYDRKAPAQV
RRFQVLVSLMLSSQTKDQVTGAAMQKLRAHGCTVENILATDDETLGKLIYPVGFWRTKVK
YLKLTSAMLQREFGGDIPNTVEGLVRLPGVGPKMAHLAMDIAWDQVSGIGVDTHVHRISN
RLGWLRKPTKNPEETRKLLEEWLPRELWSEINWLLVGFGQQVCLPVNPLCSVCLNQYSCP
SAHKSSPVKRPKSGSPRAQSSSSPCKVKTEPEQEIATKNEMIKQEPTCTSTSRRRRIKTK
VNR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctcaatgtttcttctagtctgttgtggcacgagggtcttccatgcagtccct
ggtttcaccatgaactctccgtacttcgtgcagacgtgcaggtctgttgtgacccggagt
ggagctggggctgcaggcggagctgctgcaggctctctccggtccaaactcacccggtca
gcgggggttggagccgcggttccccccgtggaggtgaaggtagaggccgaggaacccaag
gtctcctcggtcccctccacaacaaccggaagctgtaatgaagtcatccagcaggccaca
gtgctgatgaaaacagagactgtggttttacaaaactctccacgtggacacaagagaaca
catctcaaagtggaatatgacaggaatgatggtgtttcctcagtgaagacggagcactgg
gaacctctgaattggaagaaaccgttagaattaatccgtgagatgaggagcagtcgtgat
gcacccgtagataacatgggagcagaaaaatgctacgacagaaaggcccctgcacaggtg
agacgtttccaggtgctggtgtcactcatgttgtctagtcagacgaaggaccaggtgaca
ggagctgctatgcaaaagctgcgagcacacggctgcactgtagaaaatatacttgccact
gatgacgaaacactcggcaaacttatctatcctgtcggcttctggaggactaaggtgaaa
tatctgaagctgacatcagccatgctgcagagggaatttggaggagacatcccaaacaca
gtggaggggctggttcgcctgccgggagtcgggccaaaaatggctcacctggcaatggac
atcgcttgggaccaagtgtctggcattggtgtggatacccacgtgcatcgtatctctaac
aggctgggctggctcaggaaaccgaccaagaaccctgaggaaacacgcaagctcctggag
gagtggttacccagggagttgtggagtgagattaactggctgcttgtgggttttggacag
caggtttgcctgcctgtcaatcccctctgctctgtgtgcctgaaccagtacagctgccca
tcagcccacaagagctctccagtgaagaggcctaaatctggatcaccacgtgctcaaagt
tcatcttccccctgtaaagtaaaaactgaacctgagcaggaaattgcaactaaaaatgaa
atgataaagcaggagccaacatgcacctctacttcacggagaagacggataaagaccaag
gttaaccgatga
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