Cololabis saira (Pacific saury): 133452532
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Entry
133452532 CDS
T09849
Symbol
nectin4b
Name
(RefSeq) nectin-4 isoform X1
KO
K06593
poliovirus receptor-related 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
csai04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
133452532 (nectin4b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133452532 (nectin4b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133452532 (nectin4b)
Cell adhesion molecules [BR:
csai04515
]
Immunoglobulin superfamily
Nectin family
133452532 (nectin4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
C2-set_2
ig
Ig_2
LapA_dom
Sema4F_C
DUF6377
Ig_5
Motif
Other DBs
NCBI-GeneID:
133452532
NCBI-ProteinID:
XP_061587891
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Position
10:complement(18546529..18570181)
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AA seq
588 aa
AA seq
DB search
MDSRGEVMVLLLLSVSCVGGDFVEPREPVTSLRSLGDAQTRLPCVYKEEEGEKVVQVTWY
KELPNGTKEQIITAHFQDGHTEFGRYSGRVRFENGNPTENSALLIPTTEASDEGRFTCHI
STFPNGNFERHFILTVWVLPISSLDPVTLVEGQEFGVVASCRAVGRPLPQLSWDTDLQGL
TQSRIGEGGTVTSLFSLHPLRSMNGKKLDCLVSHPGLKEPRRITNRVAVQYPPDATISAS
PGHWYVGLEEAELMCEVVGFPKPQNISWTRRGGALPNGVSVTEEKLIFGRALRMNDSGVY
ECAVRNSLGVGKAEFTLNIAEQSQRKSDAPVDNQLLIIIIGASAGAVVLGLVLVVLLVNS
HHRRRNRKLERELNEKRDEISNLSRQNSFRRMNSVSTDPRVQPEDYVHFMDDNRIKNSQI
SLGLLHCKGSQSTLGRGWGPAGRVDELGRPVVWCDGEESLRGAEIDGEKEERSRALKLNL
KGSNMSLVCMSVREDSGLPSSLTPLKPQQDDCVGPQESDQGHLQERDSPSEDDWAPTQSG
REGHDDEESNSSCQISEALTNHFYYSKGLLRPKPHSNAILMTTKSQII
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggattcgagaggagaagtcatggttctgcttcttttaagtgtgtcgtgtgttggcggt
gactttgtggagcctcgggagcccgttacctccctgcgctccctgggcgatgctcagacc
cggttgccctgcgtctacaaggaggaggagggggagaaggtggtgcaggtcacctggtac
aaggagctcccaaatggcacgaaggagcagatcatcacggcccactttcaggacggccac
acagagtttgggcgttactctggcagggtgaggttcgagaacggcaaccccacagagaac
tcagccctgctcatccccacgacggaggcgtccgacgagggcaggttcacttgtcacatc
tccaccttccccaatggaaactttgagagacacttcatactcactgtctgggttttaccc
atttcctccctggacccggtgactctggtagagggccaggaattcggtgtggttgccagc
tgccgagctgtgggtcgcccacttccacagctctcctgggacacagacctgcagggcttg
acccagagccgcatcggcgagggcgggaccgtgaccagcctcttctccctccacccgctg
cgcagcatgaacgggaaaaaactggactgcttggtgtcacatccgggcttgaaggaaccc
cgtaggatcacaaaccgcgtggcggttcagtatcccccagatgccaccatttccgcctct
cctggtcattggtatgtgggtttggaggaagctgagctgatgtgtgaagtcgtgggtttc
cccaaacctcagaacatctcctggacaaggagaggaggagctcttcccaatggggtgtct
gtgactgaagagaaactgatttttggacgggccctccgcatgaatgacagcggggtctac
gagtgtgcggtcagaaacagtctgggagtgggaaaagccgagtttaccttaaatatagca
gagcaatctcagcggaagagcgacgcccccgtcgacaatcagctgctgatcatcatcatc
ggcgccagtgccggagctgtggtcctgggcctggttctggtggtgctgctggtcaacagc
caccaccggcggcgcaacaggaagctggagcgggagctcaacgaaaagagggatgaaatt
agcaacctctcgagacagaactccttcagaaggatgaactctgtcagcacagaccccaga
gtgcagccggaagattatgtgcatttcatggacgacaaccgaataaaaaacagccaaata
tctctggggctgctacactgcaaaggcagccagtccaccctgggtagggggtggggacct
gcaggacgggtggacgagctgggacgtcccgtcgtctggtgcgacggcgaggagagcctg
agaggagccgagattgatggggagaaggaggagcgcagcagggcgctgaagttgaacctg
aagggcagcaacatgtcactggtatgcatgagcgtcagagaggactcgggcctcccatcg
tctctgactcccctgaagccgcagcaggacgactgcgtgggccctcaggagtcggaccag
ggccacctgcaggagagagactctccgtctgaagacgactgggctcccactcagtctgga
cgtgagggacatgacgacgaggaaagcaacagctcgtgccagatctcagaggctctcacc
aaccatttttactacagcaaagggctgctcaggcccaaaccacactccaacgccattctg
atgaccacaaagtcgcaaatcatttaa
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