Cololabis saira (Pacific saury): 133455207 Help Entry 133455207         CDS       T09849                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism csai  Cololabis saira (Pacific saury) Pathway csai04010   MAPK signaling pathway csai04137   Mitophagy - animal csai04141   Protein processing in endoplasmic reticulum csai04210   Apoptosis csai04217   Necroptosis csai04621   NOD-like receptor signaling pathway csai04622   RIG-I-like receptor signaling pathway csai04920   Adipocytokine signaling pathway csai05132   Salmonella infection csai05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:csai00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     133455207 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     133455207 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     133455207 (traf2b)   09143 Cell growth and death    04210 Apoptosis     133455207 (traf2b)    04217 Necroptosis     133455207 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     133455207 (traf2b)    04622 RIG-I-like receptor signaling pathway     133455207 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     133455207 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     133455207 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     133455207 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:csai03019]     133455207 (traf2b)    04121 Ubiquitin system [BR:csai04121]     133455207 (traf2b) Enzymes [BR:csai01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      133455207 (traf2b) Messenger RNA biogenesis [BR:csai03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      133455207 (traf2b) Ubiquitin system [BR:csai04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     133455207 (traf2b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 zf-C3HC4_2 zf-RING_2 zf-RING_6 TRAFD1-XIAF1_ZnF zf-RING_UBOX MscS_porin ATG16 zf-C3HC4_5 ZapD Motif Other DBs NCBI-GeneID:  133455207 NCBI-ProteinID:  XP_061590113 LinkDB All DBs Position 11:24759345..24774480 Genome browser AA seq 516 aa AA seqDB search MAHISMDCTSSLPGIPLSVLSVPMENKYKCQQCLQVLRKPVQAQCGHRFCVHCYKQLTSS GPKPCEACRQEDIYEEPISILNINEAFPDNAAGREIASLPARCLNQDCTWSGSIKEYEAQ HEGRCEYERIQCEACQSFILSKDKERHNERECDARTLNCKYCKITFNFKDIKAHDEICLK FPLQCKDCGKKKIPREKFNDHIKSCTKSKSACPFSEVGCKSMIENGKLSDHEHSSTMEHL RLLLPMVLSMARTRVEASGPGEWQEDSGLGLYRAPDEGSGAAAPAHTVDLDKKVGALENI VCVLNREVERSSYTLEAFAHQHRLDQEKIENLSNKVRQLERTLNGRDLQLSETMQLVREL QFCTYDGIFVWKITDFSTRRQEAVVGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGT HLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVTSTSFQRPMSEMNI ASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVDLTGL NT seq 1551 nt NT seq  +upstreamnt  +downstreamnt atggcccacatctcaatggactgtacaagctctttaccagggattcctctcagtgtccta tcagtgcccatggagaataaatacaaatgtcagcaatgtctgcaggtgttacggaaacct gtccaggcccagtgtggacaccgtttctgtgtacactgctacaaacagctcaccagctcg ggcccaaagccttgtgaagcctgccgccaggaagacatatatgaggaacctatttccatt ctaaatatcaatgaggcattcccagacaatgcagcaggtcgagaaatagcaagccttcct gccagatgtttaaatcaagactgcacctggtctggatctattaaggagtatgaggctcaa catgaagggcgctgtgagtatgaacggatacaatgtgaggcgtgccaaagctttatcctg tccaaggataaggaacgacataatgagagagaatgtgacgcaagaaccctcaactgtaaa tactgcaaaattacattcaactttaaagacattaaggcccatgatgagatctgtctcaag tttcccttacaatgcaaagattgtggcaagaagaagatacccagagaaaagttcaatgac cacatcaagtcctgcaccaagtccaagagtgcctgtccattcagtgaagtgggctgtaaa tctatgatagagaacgggaagctcagcgaccacgagcacagcagcaccatggagcacttg cgtctgctgctgcccatggtgctgtcaatggcccggactcgtgtggaggcgagtggaccg ggggagtggcaggaggactctgggctggggctttacagggctccagatgagggaagtggg gctgcagcccccgctcacaccgtggacttggacaaaaaagtgggtgccctagaaaacatt gtgtgtgtcctgaatcgcgaagtggaacgcagttcatatacactggaggctttcgcacat cagcatcgtttagaccaagaaaagatagaaaatttgtctaacaaagtacgacagcttgag agaacgctgaatgggagagacttgcagctgtctgaaaccatgcagttggttcgagaactt cagttctgcacctacgatgggatatttgtctggaaaattactgatttctcaacccgcagg caggaagccgtggttggtcgagcgcctgcaatgttttcaccagcattttattccagcaag tatggctacaaaatgtgtctcaggctgtatttgaacggtgacgggaccggtcggggcaca cacctctcactgttctttgttgtcatgaggggcaagtacgacgcgctgctcaaatggcct ttcagtcagaaggtgaccctaatgctcctggatcagaacaacagggagcatatcattgat gctttccgccctgatgtcacctccacctccttccagcggccaatgagtgagatgaacatc gccagcggctgcccgctcttctgtccactggctaagctggctggcaagagtccctatcta agagatgacacaatcttcatcaaagccattgttgaccttacaggcttgtag

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