Cololabis saira (Pacific saury): 133456771
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Entry
133456771 CDS
T09849
Symbol
rapgef3
Name
(RefSeq) rap guanine nucleotide exchange factor 3 isoform X1
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04081
Hormone signaling
csai04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
133456771 (rapgef3)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
133456771 (rapgef3)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
cNMP_binding
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
133456771
NCBI-ProteinID:
XP_061591326
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Position
12:complement(7302156..7332189)
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AA seq
877 aa
AA seq
DB search
MTPRRSKPEILQAIAAMENLVKSMCSLPRRRTPDNGETPLPEALDSKDTMKQFLSDRVVK
AGRSVYGVIIERSPGLIRDRKYHLKTYRHCCSGKDLVDWLMKQNDCLQSRSQAVGMWQVL
LDEGILTHVKDELNFHDKDTQFYRFKDSEFGLNPVSNEKESEDELQEALCLLSQLGPDAL
LTMILRKCPGQRTAEDLEIIYEELLHVKAAAHLSTSVRKELASVLLFESHPKAGTVLFSQ
GDKGTSWYIIWKGSVNVITHGKGLVTTLHEGEDFGQLALLNDAPRAATIILREDNCHFLR
VDKQDFIRILKDVEANTVRLEEHGKTVLVLEKSADSALQGGAGTKSKYSVMSGTPEKIVE
HLLDRIKLDSNGNDPTDSCVGDFLLTYKVFMSSSQLCPALQHHYQAELSEGSEQEKAAYV
LNAKQKVVRFIGQWVALYGLHLKEDAVALDFLERMKKEVASDHRLSSMLREQFKERRRTR
VLENGYQSLSRNHHFDWFSNCEEPVGRVQTIKAQDKVLYEIYRPDGKPLTLMLPVNSSVQ
DVMSAIVKPGGDHVLVKMNSTGDRVQLKLDTTAVFTGLGLSERLFICTSSEVEQLRPLKE
QQGPEQGTTDTLEQMGSKDTATELTNYDWELFTALHEVELVYYIFGRHKFPGAITANLQR
FVRHFNEVQYWVVTELCLCEDLVKRAVLLKKFIKIASVLKEQKNLNSFFAVMFGLSNSAV
QRLYKTWERIPSKTKRIYCAYERLMDPSRNHRAYRLAVAKLSPPYIPFMPLLLKDMTFIH
EGNPTYVDKLVNFEKMRMLAKTVKIVRNCRSQPYVPSSPQRGLADRMFLEGPSSRLSTYS
DHVLPLRTPSNIRHYVQNLKVIDNQRKLTQLSRTIEC
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgactccacggaggtctaaaccagagattctacaagccatcgctgctatggagaactta
gtcaaatccatgtgctctctgccacgacggcgcacaccagacaatggagaaactccgctg
ccagaagccctggattcaaaggacacaatgaagcagtttctttcagatcgtgttgtgaag
gcagggagatccgtgtacggcgttattatcgagaggagtcccggtctgatccgagacaga
aagtatcacctgaaaacatacagacattgttgctctggtaaggacctggttgattggctg
atgaagcagaacgactgcctccagtccagaagccaggccgttgggatgtggcaggtctta
ctcgacgagggaatcctcactcacgtgaaagatgagttgaacttccacgacaaggacacc
cagttctaccgcttcaaggactcggagtttggcctgaaccccgtcagcaatgagaaggag
tcggaggacgagcttcaggaagctctgtgtctgctgtctcagctcggtccggacgctctg
ctcaccatgattctgcgtaaatgccccggtcagaggactgcagaggacctggagatcatc
tacgaggagctgctccatgtgaaagctgccgcacatctctccacctcggtgcgtaaggag
ctggcgtcagtgctgctgtttgaatcccatcctaaagctggaacagtgttgttcagccag
ggagataagggcacgtcctggtacatcatctggaaaggctctgtaaacgtcatcacgcat
gggaagggccttgtaaccactctgcatgagggggaggactttgggcagctagctttgctg
aatgacgcccctcgcgctgccaccatcatcctgagagaagacaactgccatttcctccgg
gtcgacaaacaggattttattcggatcctcaaggatgtggaggcaaacaccgtgcgactg
gaggagcatgggaagaccgtgctggtgttggagaagagcgccgactcggctctgcaagga
ggagctggaaccaagagcaagtacagcgttatgtcgggaacacctgagaaaattgtggaa
cacctcctggataggatcaaactggattccaacggaaatgaccctacagactcctgcgtc
ggtgactttctcctaacctacaaggtgttcatgtcctccagtcagctgtgtcctgccttg
cagcatcactaccaggcagagctgtccgagggctcggagcaggagaaggctgcctacgtc
ctcaacgccaagcagaaggtagtgagattcatcggccagtgggtggcgctctatggcctc
catctgaaagaggacgctgttgctttggactttttggagagaatgaaaaaggaggtggca
tctgatcaccgattgtccagcatgctcagggagcaatttaaggagagaaggagaacaaga
gttttggagaatggatatcagtcgctgagtaggaaccaccactttgactggttttccaac
tgtgaggagccagtggggagggtccagacaataaaagcacaggacaaagtgttgtatgag
atctacaggccagacggcaaacctctcactctgatgctgccagtgaactcatcggtgcag
gatgtgatgtcagcaatagttaaacctggtggagatcatgtacttgtcaaaatgaattcc
accggagacagagtacagttaaaactggataccactgcagtcttcaccggcctgggtctc
agtgagagactgttcatctgcacgagcagtgaggtggagcagctgaggcccttaaaggag
cagcagggcccagagcaaggaactaccgacacccttgagcagatgggctctaaagacacg
gccactgagctcaccaactacgactgggaactgttcactgccctgcatgaggtggagctt
gtttactacatatttggccgtcataaattcccaggtgccatcacagcgaacctgcagcgc
ttcgtgcgtcacttcaacgaggtgcagtactgggtggtgacggagctgtgtctctgcgaa
gacctggtgaaacgggccgttctgctcaagaagttcatcaagatcgcttcagtgctgaaa
gagcagaagaacctgaattcgtttttcgctgtgatgtttggtctaagcaacagtgccgtg
cagaggctttacaagacctgggagagaataccgagcaagacaaaaagaatctactgtgct
tatgagagactgatggacccctcacgcaaccacagggcctacagactggctgttgctaaa
ctcagtcccccttacatccccttcatgcctctgctgctgaaagacatgacattcatccac
gagggcaatccgacatacgtagacaaattggtcaattttgaaaagatgcgaatgcttgca
aagacagtgaaaatagtgcgaaactgcagaagccaaccgtacgtgccttcatctccacag
cggggtctggcggatcggatgtttctggaagggccttcttctcgcttatccacgtactcg
gaccacgtcctccctctgcggacgcccagcaacatcagacactacgtccagaacctgaag
gtgattgacaaccagcggaaactgacgcagctatccagaacaatcgaatgctag
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