Cololabis saira (Pacific saury): 133457034
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Entry
133457034 CDS
T09849
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
133457034 (plxnd1)
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
133457034
NCBI-ProteinID:
XP_061591845
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All DBs
Position
12:complement(18991977..19063367)
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AA seq
1900 aa
AA seq
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MPPSMGTAVFSLLGVLAFMETRRSASALHIQQAFFSLNPTNNFAVDPVSGKVYLASVNTV
FQLNGTLSVEVEERTGPVEDNLLCHAPQLPQAPCEHPKALTDNYNKLLELDREQGVVVVC
GSVYQGFCELRKMGNISEIAVEFPPQGEKTVFPSMLNIAANHPNASTVGLVFKSHGGNTL
LLVGATYTGAGTQFFPKNHSKEDLRFENTPEIAIRSLNIKDLSRLFTYDINPSEDNVFKI
KQEVKTKNKLNFVRAFIQKTYSYIAFNNDAKMGHKESQPNSILARICLDTENPRKSSGPE
SRKLTESYIQMPLQCGFNGNIFNRLLSVFPAEVQAEDGSGPESYLFGVFSKADRKSALCA
FKFSDIEEEIRHGRRNCSSSPSSDIQVLDSVIQGSGAICILRGNLVLQPEQLDCGAAHLQ
HPLALRRPLMAVPIFEYPGLTSVSVDNVHNHTVVFLGTNNGRLRKLTLANMALANQWTLK
LPSGEAVHHMMSFDPSDSNFLYVMTSHHMLRVKVAQCDQWKSCSACLGAGDPHCGWCTLE
NRCTIQKECAQALLARTWISMSEGPDQCPSITLTPPEISISADIKNVGILINGTVPNLNG
SRVECEYWPGVSTTATLHLDQGPSQIQTCPLLPRQNYQPILPGTDHLSVSVAIKVNGTSV
VSGSFIIYDCERTGAIHPTTSCVSCLSTKWKCYWDQENHQCVSSKDDSTHNLLESPASCP
RLVPSQVLPSPSGLAQDFNLSLINIPERETLECDFGTEERYEATWLNDSTVKCSGVTLFT
DQRSHVYHLNLRRTRYFSSYGKDMFIDSPQPMNVEVYNCGAGSSDCSQCWGREDQRHLCG
WCENSCTPRDDCLANKDQCPAPEIHKISPLRGPVEGGTLLTVQGKNLGRRADAVRVFIGD
VPCDLLPERYTVSVELVCRTGRPEHDRTDIVLVDVDQSGRGRSKESFSYLVPKLLSLQPN
RGSRAGGTRVAIWGEHLDIGSQVKVKVNNTLECRITEKTDQTIECIMPPVMQANTESVTV
CVEFEDHPCQDTELSDMYTYEKNPTISSIHPKKSFLSGGRTITVTGQGFDLVQRAVMDVV
AVERTNCAVVSASTISCPSPASSQSLEFSVKFFLDGVLYTGDSPAFSDYTPEEDDGEPHK
GHFLLEYVEDPQFFTANKEKLIKHHSGEPLTLIINKVPSDLELLPEEYSVMIGSYPCNIS
FHNDQLFHCTINGLPSTGERELPVTVQVGNFHHMIAKVQLGGSELAIVVSIVVCCVLLLL
CTVALVVYCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQG
IPFLEYKQFVTRTFFPKMCSDYEKSLVQPAYVNDGLGPRALPETHPLLQDWTATNTTRPN
VEEGITLFSTLLNNKHFLITFVHALEQQKDFAVRDRCSLASLLTIALHGKLEYYTSIMKD
LLVDLIDASASKNPKLMLRRTESVVEKMLTNWMSICMYSYLKETVGEPFFLLLCAIKQQI
NKGSIDAITGKARYTLNEEWLLRENIEAKPQNINVSFQGCGIDSLSVRVMNTDTICQVKE
KIIEAFYKNLPFSQWPRAEDVDLEWFDSGSNSKLLQDLDNTSKMEDGRKKLNTVVHYQIP
EGASLAMSMKDSKENTLGRVKDLDTEKYVHLVLPHDELIETKKSHRHSHRKKVLPEIYLT
RLLSTKGTLQKFLDDLFQAILSIPADHPPLAVKYFFDFLEEQADKRGITDPDTLHIWKTN
SLPLRFWVNILKNPQFVFDIDKTDHMDACLSVIAQAFIDACSISDLQLGKDSPTNKLLYA
KEIPEYKKRVQCYYQQIQDMPPLSEQEMNAHLAEESRKYRNEFNTNLALTEIYKYAKRYR
NQVVNALEANPTARRTQLHHKFEQVIALVEDNIYECCSEA
NT seq
5703 nt
NT seq
+upstream
nt +downstream
nt
atgcctccttcgatggggacagctgttttctcgctcctcggcgtcctggctttcatggag
acgcgccggagcgcgagcgcgctgcacatccaacaggctttcttctctctcaacccaacc
aataacttcgcggtggacccggtgtcgggaaaggtgtacctggccagcgtcaacacggtt
ttccagctgaacgggacgctgagcgtggaggtggaggagaggacggggccggtggaggac
aacctgttgtgccatgcgccgcagctgccccaggcgccctgcgagcaccccaaagccctc
accgacaactacaacaagctgctggagctggaccgggagcaaggggtcgtggtggtgtgc
gggtccgtgtatcagggcttctgcgagctgaggaaaatggggaatatttcagagatagcc
gtggagttcccccctcagggcgagaagaccgtgttccccagcatgctcaacatcgccgcc
aatcaccccaacgcgtccaccgtggggctggtgttcaagagccacggggggaacaccctg
ctgctggtcggggccacttacaccggggctggaacacagtttttccccaaaaaccacagc
aaggaggacctgcgctttgaaaacactccagaaatcgccatccgctccttgaacatcaag
gatttatccagactcttcacctacgacatcaacccctcggaggataacgtgtttaagatc
aagcaagaggtcaagaccaaaaacaagctgaactttgtgcgcgccttcatccagaagacg
tactcctacatcgcctttaataatgatgcgaaaatgggccacaaggagagccagcccaac
agcatcctcgccaggatatgtctggataccgagaaccccaggaagtccagcgggccggag
agcaggaaactcacggagtcctacatccagatgcctctccagtgcggatttaacgggaac
atcttcaaccggctgctgtccgtgttcccggcggaggtccaggcggaggacgggagcggc
ccggagtcttacctgttcggagttttttctaaggcggacagaaaaagtgctctgtgcgcc
ttcaagttcagcgacatcgaggaggagatccggcacggccgcaggaactgctccagctcc
cccagcagtgatatccaggtgctggacagtgtcatccagggctccggggccatctgcata
ctgagaggaaacctggtgctgcagcccgagcagctggactgcggcgcggcacacctgcag
catcctctggctctacggaggcctctgatggccgttcctatttttgaatacccaggcctt
acgtcagtctctgtggacaacgtgcacaaccacacggtggtttttctgggaaccaacaat
ggacgacttcgtaagctgaccctggcgaacatggctttggccaaccagtggacgctgaag
ctaccgtccggcgaagcagtccaccacatgatgtccttcgaccccagcgacagcaacttc
ctctatgtcatgacgtctcaccatatgctgagagtgaaagtggcccagtgtgaccagtgg
aagagctgcagtgcctgtttgggagcaggtgaccctcactgcggttggtgcactctggag
aacagatgtaccatccagaaggagtgtgctcaggccctgttggcacgtacttggatcagc
atgagtgaaggccccgatcagtgtccatccattaccctgacacccccagaaatcagcatc
tctgcagacatcaagaacgtcggcatcctgataaatggtactgttcccaacctgaacggc
tcgcgtgtggagtgtgagtattggccgggggtttccaccaccgccacactgcacctggat
cagggtccctcccagatccagacctgtccgctgctccctcgacaaaactaccaacccatc
ctacccggcacagatcacctgagtgtttctgtggcaataaaagtgaacggtacatctgta
gtatctggcagcttcatcatctatgactgtgagaggactggagcgatacaccccaccaca
tcatgtgtgagctgcctgagcaccaagtggaagtgttactgggaccaagagaaccaccaa
tgtgtctcaagtaaagatgattcaacgcacaacctgctggagagtccggcttcctgtccc
agactggttccctcacaggttcttccatcaccatcaggactggcccaagactttaacctg
tccctcatcaacatcccggagagggagacgctggagtgtgactttgggacagaggagcgg
tacgaggccacatggctgaacgactcgaccgtcaagtgcagcggggtgacgctgttcact
gatcagaggagtcacgtctaccacctcaacctgaggaggacaagatacttcagcagttac
gggaaggatatgttcatcgacagcccgcagcccatgaatgtggaggtgtacaactgtgga
gcgggaagctcggactgttcccaatgctggggccgtgaggatcagcgacacctctgtggc
tggtgcgaaaacagctgcacgccaagggatgactgtctggccaacaaggatcagtgtccg
gctcctgagatccacaagatctcccccctgaggggtcccgttgaagggggaacactgctg
accgtacagggcaagaacctgggccggagggctgacgcggtcagggtatttataggcgat
gtgccatgtgatctgctgcctgaacgctatactgtctctgtagagcttgtgtgtcgcact
gggaggcctgaacatgacagaacggatattgtccttgtggatgtggatcagagcggcagg
gggaggtcgaaagagagcttctcgtacttggtcccaaagcttctcagtctccagccaaat
agaggctcccgtgctggaggaaccagagtggccatctggggggaacatctggacattggc
tctcaggttaaagtcaaggtcaacaacacgctggaatgcagaatcacagagaaaacagat
caaacgattgaatgcatcatgcctccagtcatgcaggcaaacacagagtcagtgacagtt
tgtgtggagtttgaggaccatccctgtcaagacacggagctcagcgacatgtacacctat
gagaagaaccccactatcagctccatccacccgaaaaagagctttctcagtggtggcagg
accatcactgtaacgggccaagggtttgacctggtgcagagagccgtcatggacgtggtg
gcagtggaacgaacgaactgtgcagtggtctctgcctccacaatcagctgtccatctcca
gcttccagccagtccctggagttctccgtgaagttcttcctggatggagtcctctacaca
ggagacagccctgccttctctgattacacgccggaggaagacgacggggaacctcataaa
ggccacttcctgttggagtatgtggaggaccctcagttcttcacggctaacaaagagaag
ctgatcaaacaccattcaggagagccgctgacgctcatcatcaataaagtgcccagcgac
ctggagctgttgccggaggagtactctgtgatgattggctcatatccctgtaacatcagc
ttccataatgaccagctgtttcactgcaccatcaacggactgccgagcaccggtgaaagg
gagctgcccgtcaccgtgcaagttgggaactttcatcacatgatagccaaagtgcagctg
ggcggcagcgagctggccatcgtggtatcgattgtggtgtgctgtgtgctgctgctgcta
tgcaccgtggctctggtggtgtactgcacaaagagccgaagggcagaacggtactggcag
aaaacgcttctccaaatggaggagatggagtcccagatcagagaggagatccgcaaagga
tttgcagaactgcaaacagacatgacagatctgaccaaggagctcaatcgcagccagggc
atccccttcttggagtacaaacagtttgtcacgcgcacgttcttccccaagatgtgttcg
gattacgagaagagtctggtccagcccgcctatgtgaacgatggtttgggacctcgagca
ctgccggagactcacccactgctgcaggactggacggccaccaacacaacgaggcctaac
gtagaggagggcatcacactgttctccaccctgctcaacaacaagcacttccttatcacg
tttgtccatgccttggagcagcagaaagactttgctgtacgcgacagatgcagcctggca
tccttgctcaccatcgccctccatggtaaactcgagtactacaccagcatcatgaaagac
ctgctggttgatctcattgatgcttcagcttccaaaaatcccaaactgatgctccgccgc
accgagtctgttgtggagaaaatgctcaccaactggatgtccatctgcatgtacagctac
ctcaaggaaacagtgggtgagccattcttcctgctgctttgtgccatcaagcagcagatc
aacaagggctccatagatgccatcacaggaaaggcccgctacaccctcaatgaggagtgg
ctgctccgtgagaacatcgaggcaaagccacagaacatcaacgtatcattccagggctgt
ggcatagactcattgtccgtcagggtcatgaatactgacacaatctgccaagttaaagaa
aaaatcatagaagccttttataaaaacctgcctttctctcagtggccgcgagcagaggat
gtggacctggagtggtttgactctggcagcaacagtaagcttctgcaggacctggacaac
acctcgaagatggaggacggcagaaagaaactcaacacggtcgtccactaccagatccca
gagggagcatcgctggccatgagcatgaaagacagcaaagagaacaccctggggagagtc
aaagatctggatacagagaagtatgtgcacttggtcctaccacatgatgagttaatagag
accaagaagtcgcacaggcacagtcatcgtaagaaggtcctgcctgaaatctacctgaca
cgcctgctgtcaacaaagggaactcttcagaagttcttggatgacctctttcaggccatc
ctcagcatccctgcggaccacccgccgctggctgtcaaatacttctttgacttcctggag
gagcaggctgacaaacggggcatcacagaccctgacacgctgcacatctggaaaaccaat
agtttaccactgcgtttctgggtgaacatcctgaagaaccctcagtttgtgtttgacatc
gataagacggaccacatggacgcctgcctgtctgttatcgcccaggccttcatcgatgcc
tgctccatctccgacctgcagctagggaaggactctcctaccaacaaactgctgtatgcc
aaggagatccccgagtataagaagagagtccagtgctactaccagcagatacaggacatg
ccgccgctcagcgagcaggagatgaacgctcacctggccgaggagtcaagaaagtacaga
aatgagttcaacaccaacctggccttgacagaaatctacaaatacgccaaaagatacaga
aaccaggtggtgaatgctctggaggcgaaccccactgcacgtcgcactcagctgcaccac
aagttcgagcaggtcattgctcttgtggaggacaacatctacgagtgctgcagcgaagct
tga
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integrated database retrieval system