Cololabis saira (Pacific saury): 133457979
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Entry
133457979 CDS
T09849
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecules
csai04520
Adherens junction
csai04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133457979
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133457979
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
133457979
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133457979
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133457979
Enzymes [BR:
csai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
133457979
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
133457979
Cell adhesion molecules [BR:
csai04515
]
Immunoglobulin superfamily
Type II RPTP family
133457979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Tc-R-P
PTP-SAK
Fn3_VIN3
Y_phosphatase3
V-set
DSPc
Interfer-bind
CRLF2-like_D2
PTP-NADK
C2-set_2
PTPlike_phytase
Fn3_PTPRU
Insulin_TMD
DUF5849
Motif
Other DBs
NCBI-GeneID:
133457979
NCBI-ProteinID:
XP_061593382
LinkDB
All DBs
Position
13:complement(4258289..4449601)
Genome browser
AA seq
1813 aa
AA seq
DB search
MSSSPRTRAEQSTSQNMGLGSRGLPPFTRAVLHLVLLARLVPPSHAESIPSFIKSPDDQI
GISGGVASFVCQAVGEPRPRITWMKKGKKVSSQRFEVLEFDDGSGSVLRIQPLRTHRDEA
IYECTASNSVGEINTSAKLTVLEEDQIPHGFPNIDMGPQLKVVERTRTATMLCAASGHPD
PEIHWFKDFLPVDIDSSTGRIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNRAGTRY
SAPANLYVRVRRVPPRFSIPPTNAEVMPGGSVNLTCVAVGAPMPFVKWVSGEEELTQQDE
MPIGRNVLELTNIQRSANYTCVATSSLGLIETTAQVTVKALPKMPTSLLVTETTATSVTL
TWDSGNPEPVSYYVIQYRSKLSDNGFQEVDGVATTRYSIGGLGPFSEYEFRVMAVNSVGR
GPPSSTVDTRTGEQAPSSPPLHVLASMLSSSTMLVQWEPPEEPNGQIQGYRVYYSSEPGD
PLSSWQIHNTDASQFTTISALTADITYSLTVLAFTSVGDGPPSDVLQIKTRQGVPAQPSS
FEAEAELDTRVMLSWLWPVQDAVISFDLLYWEANTPADKHRVTFGAAGSYAVDGLKPDTL
YLFSLAARSDVGLGAFTQPAEARTAQSLPAAPPRRVEAEVLNSTAVRMTWKPPLSVKQHG
QVQGYRLVCSRLENGQPYGQSIFMDISTPDAQEAVITGLLPETTYLLLLAAYTSKGDGAR
SKARTLTTTGAVPGKPTMMISTMMGNTALIQWQPPKEIVGEHVGYQLQYKRADEESFTVK
DFRKTDDYFTVTGLHKGTTYIFKLAAKNRAGLGEGYMKEIVTPEDIPSSYPQNLSVVGLT
SSSTKLAWEPPPLAERNGKIVKYEVVYRDINSQHNNTNTTAETQMAIQGLQPDTTYDIRV
QAFTSKGGGPLSPSVQIRTMSTSMPAFTRNFGAQAVMKSSVLLTWEVPETYNSQVPLKIL
YNQQSVEVQGHLRKKLITQLQPDTEYSFVLMSRGNGAGGIQQQVSIRTAPDLLSKRPTPF
QPDEEDDGKVTIFMPEVPAAVPVRWFYVVVVPESPDSLKRWENPQEMDILELVEAGADGS
LQGESQDFLQPFIAAKLHALPEVFILGDEKKYNGFYNKLLPGEQQYRCFVLADLMKHEPQ
RTFASSPVSEAFLVKLSGVIRHPQEDPEMLWVMGPVLAVIIIIIVVIAILLFKRKHKSAA
KKEDVAGMKDSVMAHIADPVEMRRMNYQTPGMKEHIPIATFDLEDHTERLKANDGVNFSQ
EYESIDPGQQFTWEHSNMELNKPKNRYANVIAYDHSRVILAPVDGVPGSDYINANYMDGY
RKQNAYIATQGPLPETFSDFWRMVWEQRACTIVMMTRLEEKSRVKCDQYWPSRGTETYGM
IQVTVLDSMELASYSLRTFTLHKSGSSEKREVRQFQFLTWPDHGVPEYPTPTLAFVRRVK
ACYSPNAGPMVVHCSAGVGRTGCFIVIDAMLERMRHEKSVDIYGHVTCMRAQRNYMVQTE
DQYVFIHEALLEAATCGTTEVPARSLFAHIQKLSHITTGETTTAMELEFKKLASSKTHTY
RFISGNLPCNKLKNRLVNILPFEPTRISLQPIRGVEGSDYINASYMDGYRKQKAYIATQG
PSAETTEDLWRMLWEYNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNM
PQYILREFKVTDVRDGQSKTIRQFHFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQEGP
ITVHCSAGVGRTGVFITLSIVLERIRYEGVVDVFQTVKILRTQRLAMVQSEDQYQLCYRA
ALEYLGSFDHYAT
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctccccccggacccgagcagagcagagcaccagtcagaatatgggcctggga
tccagagggctgccacctttcaccagagctgttctccacctcgtgttgctggccagactg
gtccccccgtcccacgctgagagcatacccagcttcatcaagtcccccgatgatcagata
gggatttcaggaggagtggcgtcattcgtttgtcaggctgtcggtgaacccagacctcgc
atcacctggatgaagaaagggaagaaagtcagctctcagcgatttgaggtgttggagttc
gacgacgggtccggctcagtgctgcgcatccagcctttgaggacgcaccgcgatgaagcc
atctacgaatgcacagccagcaacagcgtgggcgagatcaacaccagcgccaagctcacc
gtgttggaggaggaccagataccccacggtttccccaacatcgacatggggccccagctg
aaggtcgtggagaggacgcggaccgctacgatgctgtgtgcggccagcggacaccccgac
ccagagatccactggttcaaagacttcctgcccgtggacatcgacagcagcaccgggcgg
atcaagcaactgcgctcaggtggtacaccgataagaggagcgcttcagatcgagaacagc
gaggagtcggaccagggcaagtacgagtgcgtggcggtgaacagagctgggacccggtac
tccgctccggccaacctctacgtccgagttcgccgtgtgcctccccgtttctccatcccc
cccactaatgccgaggtcatgcctggcggcagcgtcaacctcacctgcgtggctgtcggg
gctcccatgcctttcgtcaagtgggtgagtggagaagaggagctgactcagcaggacgag
atgcccatcggccgcaacgtcctggagctcaccaacatccagcgctccgccaactacacc
tgcgtggccacgtcctccctgggcctgatcgagaccacggcccaggtcacagtcaaagct
cttcccaagatgcccacctccctcctcgtgacggagaccacagccaccagcgtcactctt
acctgggactctggaaaccctgagccggtgtcctactatgtgattcagtaccggtccaaa
ctgtctgataacggcttccaggaagtggacggcgtagccacgacgcgctacagcatcggt
ggcctcggccccttctccgaatacgagttccgtgtcatggctgtcaacagcgttggccgg
gggcctccgagcagcaccgtggacacccgcacgggcgagcaagcgccctcatcaccaccc
cttcatgtgctagcaagcatgctgagctccagcaccatgctggtgcagtgggaacctcca
gaggagcccaatgggcagatccagggctaccgtgtgtactacagctctgagcccggagac
cccctcagctcgtggcagatacacaacactgatgccagccagttcaccaccatctcagct
ctgaccgcagacatcacctacagccttacagtcctagccttcacgtctgtgggagacggg
ccgccctctgatgtgctacagatcaaaaccaggcaaggagttccagctcagccgtcttct
ttcgaggctgaagctgagctggatacgcgcgtcatgttgtcgtggctttggcctgtccag
gacgccgtcattagttttgatctgctttactgggaagcaaacacccccgctgacaagcat
cgcgtcaccttcggtgcagcaggctcgtacgccgttgatggactgaagccagatactctc
tacttgttttcgctggccgctcggtccgacgtgggtctgggagccttcactcagcctgct
gaggccaggactgcccagtccctgcctgcagctcctcccagacgggtggaggcagaggtg
ctcaactccacggccgtcaggatgacctggaagcctcccctgtcggtgaagcagcacggg
caggtccaaggctaccggctcgtctgctccaggctggagaacggccagccctacggccag
tccatcttcatggacatttcaaccccggacgctcaggaggccgtcatcaccggcctgctc
cccgagaccacgtatctgctgctcctggccgcctacaccagcaagggagacggagctcgc
agcaaagccaggacgctcaccaccacaggagcagtgcctggaaaacccaccatgatgatc
agcaccatgatggggaacactgctctgatccagtggcaacctcctaaagagattgtgggg
gaacatgtgggatatcagctacagtacaagcgagcagacgaggaaagttttactgtcaaa
gactttagaaagacagacgattatttcacagtaacaggcctccacaagggaaccacttac
atcttcaaactagctgctaaaaaccgagcaggccttggggaggggtacatgaaggagata
gtcacccctgaagacatccccagcagctatccacaaaatctgagtgttgtgggcttaact
tcctcgtccacaaagctggcatgggagcctcctcctctggcagagagaaatggaaagatt
gtcaagtatgaggtggtttatcgagatattaacagccagcacaacaacacgaacactacc
gcagaaacccagatggcgatccagggtttgcaacctgacacaacgtatgacatcagagtt
caagctttcaccagcaaaggaggtggacccctaagccccagcgtccaaatcaggaccatg
tccacctcaatgccagcgtttaccaggaacttcggagcccaggcggtcatgaagtcctcg
gtcctgctgacctgggaagtgccagaaacctacaactctcaagtgcctctgaagattctg
tataatcagcaaagtgtggaggttcaaggccacctgaggaagaagctgatcacccagttg
cagccggacacggagtattccttcgtgttgatgagccggggaaacggcgccggcggcatc
cagcagcaggtttccatccggacggctcccgacctgctgagcaagaggcccactcccttc
cagccggacgaagaggacgacgggaaagtgacgatcttcatgcctgaggttcctgctgca
gtccccgtcaggtggttctacgtagtggttgtcccggagagcccggattccctaaagagg
tgggaaaaccctcaagagatggacatacttgagctggtggaggctggagctgacggcagt
ctgcagggggaaagccaagacttcctgcagcccttcatcgccgctaaactccacgccctg
ccagaggtcttcattctgggagacgagaagaaatacaacggcttctacaacaagcttctc
cccggcgagcagcagtaccgctgctttgtcctagcggacctgatgaagcacgagcctcag
aggacgtttgcgtccagccccgtctccgaggcgttcctggtgaagctcagcggggtgata
cggcatcctcaggaggacccagagatgctgtgggtgatgggtcccgtgctggctgttatc
atcatcatcattgttgtcattgccattttactcttcaaaaggaaacataaatctgcagcc
aagaaggaggacgtggcggggatgaaagactcggtgatggctcacatcgcagatccagtg
gagatgaggagaatgaattaccaaacaccagggatgaaagaacatattcctattgctact
ttcgacctggaagaccacacggagagattgaaggccaatgatggtgtgaacttctcacag
gaatatgagtccattgatccaggacagcagttcacctgggaacactccaacatggagctc
aacaagccaaagaaccgctatgcaaatgttattgcttacgaccactccagggtcatcctc
gcgcctgtagacggagttccaggaagtgactacataaatgccaactacatggacggctac
aggaaacagaacgcttacattgccacgcaaggccctctgccagagaccttcagtgacttc
tggaggatggtgtgggagcagagggcttgcacaatcgtcatgatgacccggctagaagag
aagtcacgggttaaatgtgaccagtactggcccagtcgaggtacggagacgtatgggatg
attcaggtcactgtgctggatagtatggagctggcttcctacagcctgcgaacatttact
cttcacaagagtggctcaagtgagaagagagaagttcgacagttccagtttctcacctgg
cctgatcacggtgtaccggagtatcccaccccgacgctggccttcgttcgaagagtcaag
gcttgttattctccaaatgctggacccatggtggttcactgcagcgccggcgtgggccgc
actggctgcttcatcgtcatagatgccatgcttgagaggatgaggcacgagaagtcggtg
gacatatacggccacgtgacatgcatgcgggctcagaggaactacatggtacagacggag
gatcagtacgtcttcatccacgaggctctgctggaagctgccacttgtggcaccacggag
gtcccggcccgcagcctgttcgcccacatccagaagctgagccacatcacgaccggggag
accaccactgccatggaactggagtttaaaaagctggccagctcaaaaacacacacctac
aggttcatcagcggcaacctgccatgtaacaagctgaagaaccgcctggtgaacatcctg
cctttcgagcccactcgcatctccctgcagccaatcagaggagtggagggctccgattac
atcaatgccagctacatggacggatacaggaaacagaaagcgtacatcgccacccagggc
ccgtcggctgaaaccaccgaggacctgtggaggatgctgtgggagtacaactccaccatc
gtagtcatgctcaccaaactccgcgagatgggacgggagaaatgccaccagtactggccg
gccgaacgctccgcacgctaccagtactttgtggtggaccccatggcggagtacaacatg
cctcagtacatcctgagagagttcaaggtcacggacgtcagggacggtcagtcgaagacc
attcggcagtttcatttcaccgactggccggagcagggagtccctaaaactggagagggt
ttcatcgacttcattggccaagttcataaaacgaaagagcagtttggacaagaaggaccg
atcactgtgcactgcagcgctggtgttggccggaccggcgtgttcatcactctgagcatc
gtgctggagaggatcaggtacgagggcgtggtagacgtcttccagaccgtcaagattctc
cgaacccagaggctggccatggttcagtcagaggaccagtaccagctgtgctacagggct
gctctggagtatctaggaagctttgatcactatgcaacataa
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integrated database retrieval system
