Cololabis saira (Pacific saury): 133458825 Help Entry 133458825         CDS       T09849                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism csai  Cololabis saira (Pacific saury) Pathway csai04010   MAPK signaling pathway csai04120   Ubiquitin mediated proteolysis csai04140   Autophagy - animal csai04144   Endocytosis csai04620   Toll-like receptor signaling pathway csai04621   NOD-like receptor signaling pathway csai04622   RIG-I-like receptor signaling pathway csai05132   Salmonella infection csai05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:csai00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     133458825 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     133458825 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     133458825 (traf6)    04140 Autophagy - animal     133458825 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     133458825 (traf6)    04621 NOD-like receptor signaling pathway     133458825 (traf6)    04622 RIG-I-like receptor signaling pathway     133458825 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     133458825 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     133458825 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:csai04131]     133458825 (traf6)    04121 Ubiquitin system [BR:csai04121]     133458825 (traf6) Enzymes [BR:csai01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      133458825 (traf6) Membrane trafficking [BR:csai04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     133458825 (traf6) Ubiquitin system [BR:csai04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     133458825 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4_2 zf-C3HC4 zf-RING_2 TRAF6_Z2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 zf-rbx1 CEP104_ZnF zf-TRAF_2 U-box BLI1 Sina_ZnF zf-RING_11 Motif Other DBs NCBI-GeneID:  133458825 NCBI-ProteinID:  XP_061595012 LinkDB All DBs Position 2:16440724..16452573 Genome browser AA seq 570 aa AA seqDB search MACFESKERSLEEDSYEGAVGGELSNCALAMLEKERESLLSPSEGSATFMSSSSSLQAAA PLQGYDVEFDPPLESKYECPICLMALRNAIQTRCGHRFCKSCIEKSIRDTGQRCPVDNEV LSEDHLFPDNFAKREILSLTVRCPNSGCTDKMELRHLENHLAQCQFATVPCPQCQQPVRK SVLEEHTTAECLRRPMSCPDCVEYFVFEERELHEQRCPFASIKCQYCEMDLIRDQMESHC DTDCPKAPIACTFSIFGCKERMLRHNLAQHMQEFTQMHMRYMAEFLRGLSINGTTPKPLW TQGPSISSDDQAAAASASGCSGPRGPASCSAAAASCQPSEEMQRLREMDGRLVKQDHQLR ELIILKETQAGQLAELRRRVSMLEETVKELETQQSHGLFIWRLKGFSAHLRNQEAGQPVV EHSPGFYTGRPGYKLCLRLHLQTPNAPRCSNYISLFVHTMQGDFDGHLTWPFQGTIRLAI LDQGPDGQHHMEVMETKPDLQAFQKPVIPRNPKGFGYVTFMHLSQLNQRNYLKDDNLLIR CEVTPRFDSMIHREGPAVQPRGPESSVSRE NT seq 1713 nt NT seq  +upstreamnt  +downstreamnt atggcttgttttgaaagcaaagagaggagtttggaggaggacagctatgaaggagctgtt ggtggagagctgtccaattgtgccttggccatgctggaaaaggaacgggagtcccttctt agcccctcagagggttctgccaccttcatgagcagctcctccagtcttcaagctgctgcg cctcttcagggctacgatgtggagtttgacccacccctagaaagtaaatatgagtgccct atctgcctcatggctttaaggaatgccattcaaacacgctgtggtcaccgtttctgcaag agctgtattgagaagtccattcgcgatacaggacagcggtgtcctgtggacaacgaagtt ctgtcagaggaccatttgttccctgataactttgccaaaagggagattttatcattgact gttcgttgtccaaattcaggctgcaccgataagatggaacttcgacatttagagaatcat ttggcacagtgtcagtttgccaccgtgccgtgtccgcagtgccagcagccggtgagaaag agcgtcctggaggagcacacgactgccgagtgccttaggagaccaatgtcatgtccagac tgtgtggagtactttgtttttgaggagagggagctgcatgagcagcgctgtccttttgcc agtatcaagtgccagtactgtgagatggacctcatcagagaccagatggaatctcactgt gatacagactgcccgaaagcaccgatagcctgtacttttagtatctttggatgcaaggaa aggatgctgcggcacaacctggcccagcacatgcaggagttcacccagatgcacatgcgc tacatggctgagtttctgcgcggcctcagtatcaatggcaccacccccaaacccctgtgg acgcaaggaccttctatttcctctgacgatcaagcagccgcagcgtcggcgtcgggctgc agcgggcccagaggacctgcgagctgcagcgccgccgccgcctcatgtcagccctccgag gagatgcagaggctcagagagatggacggacggctggtgaagcaggaccaccagctgcgt gaactcatcattttgaaagagactcaggcgggtcagcttgcagagctcaggcgtagggtg tcgatgctggaggagacggtgaaggagctggagacccagcagtcccacggcctctttatc tggcgactcaaaggtttctccgctcacttgcggaaccaagaggcgggccagccggtggtg gagcacagccccggcttctacacgggccgccccggctacaagctgtgtctgcgtttacac ctgcagacccccaacgcccctcgctgctccaactacatctccctcttcgtccacaccatg caaggagattttgacggccatctcacttggccgtttcaggggaccatacggctcgccata ctggaccaggggccggacggccagcatcacatggaggtgatggagacgaagccggatctc caagccttccaaaagcctgtcattccccgcaaccccaaaggatttggttatgtcaccttt atgcacctatctcagctcaatcagagaaattatcttaaagatgataatttacttatccgc tgtgaggtgacgccacgttttgacagcatgattcaccgtgaaggaccagcggttcaaccc agagggcccgaatcatccgtttcaagggagtaa

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