Cololabis saira (Pacific saury): 133459333
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Entry
133459333 CDS
T09849
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00600
Sphingolipid metabolism
csai01100
Metabolic pathways
csai04142
Lysosome
csai04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
133459333 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133459333 (smpd1)
09143 Cell growth and death
04217 Necroptosis
133459333 (smpd1)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
133459333 (smpd1)
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GFIT
Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
133459333
NCBI-ProteinID:
XP_061595205
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Position
14:complement(42626399..42641429)
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AA seq
598 aa
AA seq
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MTPLLLLALLGCCLPAQTWGHPGPGPGPESGPGSGSGQGSGSRTGSGSVELERLSLGFNW
KNLSCPVCKAMFTILDIALMSDTNEKRVARAVGEACVRLHLADEQVCREITELFREDFIR
ALQQSLLYPSEACGVLVGPSCGTFDIYAPWNVSLPKVPKPPVRPPAPPKPGSPQSRVLFL
TDIHWDKEYQAGAAADCKQPLCCRKDSGPPGWRRREAGYWGTYSKCDLPLRTVENLLENV
AKTGPWDWVYWTGDIPAHNVWSQTRQQQLSELVVITRLIHKHLGPNVTVYPAVGNHESTP
VNSFPPPFVHGNRSTAWLYNTMAEEWSPWLPEEALKTLRYGGFYTVRIQPGLRVVSLNMN
FCARENFWLMVNSTDPADQLQWLVQVLQASEDKGEKVHIIGHIPPGLCLGSWSWNYYHIV
NRYESTITGQFFGHTHLDEFQMFYDEETMTRPLGVAFIAPSVTTFINLNPGYRVYYVDGE
YPSSSRLVLDHETFILNLTEANPQTNPRWTRLYRATEAYGLAGVSPADHDLLLNTFLKDD
GVFQRFWYFTHKGHVSEVCKEQCKTTTLCLLRGGRSDQLQQCEHPGALGGDRVRKTLC
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacccctctgctgctcttggcgctgctgggctgctgcctcccggctcagacttggggg
catcccggacccggacccggacctgaatctggacctggatctggatctgggcagggttcc
gggtccaggaccgggtccgggtctgtggagctggagcgtctcagtctgggcttcaactgg
aagaacctgtcctgtcccgtctgcaaagccatgttcaccatcctggacatagcactgatg
agtgacaccaatgagaagcgggtggcgcgggcggtgggcgaggcctgcgtccggctgcac
ctggccgacgagcaggtgtgccgggagatcacggagctgttccgggaagacttcatccgg
gccctgcagcagtccctgctgtacccctccgaggcctgcggggtcctggtgggcccgtcc
tgcgggacgttcgacatctacgccccctggaacgtgtccctgccgaaggttcccaagccg
cccgtcaggccgcccgccccgcccaagccgggctccccgcagagccgcgtcctgttcctc
accgacatccactgggacaaggagtaccaggccggcgcggccgccgactgcaagcagccg
ctgtgctgccggaaggactcggggccgcccggctggcggcgcagggaggccggctactgg
ggcacgtacagcaagtgcgacctgccgctgcgcaccgtggaaaacctcctggagaacgtg
gccaagaccgggccctgggactgggtctactggaccggggacatcccggcccacaacgtc
tggtctcagacccgccagcagcagctgtccgagctggtggtcatcacccgcctcatacac
aaacacctgggacccaacgtgacggtgtaccccgccgtgggaaaccacgagagcacgccc
gtcaacagcttccccccgcccttcgtccacggcaaccgctcgaccgcctggctctacaac
accatggcggaggagtggtcgccgtggttaccggaggaggcgctgaagaccctgaggtac
gggggcttctacacggtgaggattcagcccggcctcagggtggtttccctcaacatgaac
ttctgcgcgcgggagaacttctggctgatggtgaactccacggacccggcggaccagctg
cagtggctggtccaggtgctgcaggccagcgaggacaagggggagaaggtgcacatcatc
ggccacatcccaccaggcctgtgtctgggcagctggagctggaactattaccacatcgtc
aacaggtatgaaagcacaatcacggggcagtttttcggacacactcacttggatgagttc
cagatgttttacgacgaggagacgatgacgcggccgctgggcgtggccttcatcgccccc
agcgtcaccaccttcatcaacctcaaccccgggtaccgggtgtactacgtggacggggag
taccccagcagctcccggctggtcctggaccacgagaccttcatcctcaacctgacggag
gccaacccgcagacgaacccccggtggactcgtctgtaccgggccaccgaggcgtacggc
ctggccggcgtctcccccgccgaccacgacctgctgctcaacaccttcctgaaggacgac
ggcgtcttccagaggttctggtacttcacgcacaagggccacgtgtcggaggtctgcaag
gagcagtgcaagaccaccacgctgtgcctgctgcgcggcggccgctccgaccagctgcag
cagtgcgagcaccccggggccctcgggggggaccgtgtcaggaaaaccctgtgttga
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