Cololabis saira (Pacific saury): 133459775
Help
Entry
133459775 CDS
T09849
Symbol
fbn1
Name
(RefSeq) fibrillin-1 isoform X1
KO
K06825
fibrillin 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04350
TGF-beta signaling pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133459775 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133459775 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csai00536
]
133459775 (fbn1)
Glycosaminoglycan binding proteins [BR:
csai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133459775 (fbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
EGF
FXa_inhibition
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
133459775
NCBI-ProteinID:
XP_061596044
LinkDB
All DBs
Position
2:20538259..20610189
Genome browser
AA seq
2903 aa
AA seq
DB search
MPDRKRGGRPAQLAQLAAALLALLSLSGLGLSADVLDAANTDLVTKHNDTRASRAKRRGG
TDVLRGPNVCGSRNNAYCCPGWKTLTGGNQCIVPICRSSCGDGFCSRPNMCTCPTGQIAA
SCGSKSVQHCNIRCMNGGTCAEDHCNCQKGYVGNHCGQPVCENGCLNGGRCVGPNRCVCT
YGFTGAQCERDYRTGPCFASVNNQMCQGQLTGIVCTKTLCCATVGRAWGHPCEMCPAQPH
PCRRGFIPNHRTGACQDVDECHAIPGICQGGNCINTVGSFECKCPAGHKFNEISQKCEDL
DECANVPGLCGVGECSNTVGSYFCKCPQGYYTSVDGSKCVDVRGGYCYASVLNGRCANQN
SQLMTKMQCCCDSGRCWSDGSAPEMCPIRGTEEYQRLCIQIPEAGGVAPGPGGPDVPGIY
PLPYPRPGPGQGPGPGPGTGLGPRLFPEVIPIQGPFQTPSPYPRIPDPRQPGIILSQNIT
NTCQAFRNLCLNGRCIPTAGIGYRCECNMGFKLDVRGECIDEDECDKKPCAHGDCVNMPG
SYICQCPAGFQSTATRTECRDLDECVANGRICNNGRCVNTDGSFHCVCNAGFEISTDGKN
CQDQDECLIRNMCLNGLCINEDGSFKCICKPGFLLDSSGRMCVDIDECETPGMCMNGHCI
NTEGSFRCQCMAGMAVGLDGRICVDTHMRSTCYGGYKRGQCVRGLFGAVTKSECCCASTE
YAYGEPCQPCPPQGSADFLALCPNGVGTTGDKRDINECALDPDICQNGVCENMLRTYKCT
CNIGFEVDLSGKNCVDIDECLMNRLLCDNGLCRNTPGSFTCQCPSGFLFDPETDVCEDVD
ECESKPCINGVCVNRQGSFACVCSTGSVLDNTGLECIETAMGTCWLKIINNRCEININGA
TLKSHCCATLGEAWNSPCAKCEKDPICGKGFARVRGNNCEDVDECQVFPGVCVNGKCINT
QGSFFCQCPPGMTVDVSGRTCIDLRTEHCYLTHDDDRCGLPIAGKHRVDACCCSVGVAWG
PECDECPESGTPEYTQLCPRGPGFSHKGDFINGRPMLKDINECRMINSLCSNGRCRNTIG
SFRCRCDSGYALDSDERNCTDIDECRISPDLCGEGRCVNTPGDFECECFEGYESGFMMMK
NCMDIDECERNPLLCRGGDCVNTEGSFQCLCPQGHEIAPDGSACLDINECELSDRLCRNG
QCINMIGRYQCSCNTGYKSTEDKLECIDIDECTIENGGCETFCTNSEGSYECSCHSGYAL
MPDLRSCTDIDECEEGHDICDGGQCTNTPGTYQCLCFDGFMSSEDMKSCLDVDECELNSN
ICLSGNCENTKGSFICHCDLGYSVRKGTTGCTDINECEIGAHNCDKHATCTNTAGSFKCN
CALGWIGNGLKCTDLDECSNGTHMCSNNAECLNTMGSYRCACKEGFSGDGFFCSDSDECA
ENGNLCENGHCLNLPGGFRCECDMGFIATPDGKSCEDIDECTFAGICVNGRCQNIPGLFR
CECNPGYELDRSGGNCTDINECAYPTTCINGMCVNVPGSYLCNCPPDFELNPTRVGCVDT
RSGSCYLDVRFRGDASESLDCSNEIGVGVSKASCCCSLGMGWGNPCEHCPAVNTTEYKTL
CPGGEGFRPNPITVILEDINECQELPGLCQGGQCINTFGSFQCECPRGFALNQETRVCED
INECEQPGICGPGQCYNTIGNYTCICPADYMPVNGGNNCMDMRKSYCYRNFYSDNQTCDG
ELTFNMTKKMCCCSYNIGRAWNKPCEQCPVPSTDEFATLCGSERPGYYIDITTGRVIDID
ECREIPGVCENGVCINMIGSFRCECPIGFIYNDKLLICEDIDECQNGPVCQPNANCLNTP
GSFRCDCKPGYRFTPTGQCLDRNECLENPGVCNPGQCIDTLGSYRCICPNGYKTTRDQSM
CIDVDECERQPCGNGTCKNTVGSYNCLCYPGFQNSHNGDCIDIDECATQRGLCRNGQCVN
MVGSFLCVCNDGYELTLDGRLCADINECAVNPGTCGPGTCLNMDGSYRCICPPGYYLHEE
TCEDINECSQSSELCTFGTCSNTEGSFTCLCPEGFQISASGRRCLDVRVNYCFTKFENGR
CLAPKPQNTSKEACCCTSMPGQGWGDPCEICPRKGEDTYVVLCPTVGYERGREGGPTDID
ECINDPCVNGQCINTDGSFRCECPLGYHLDISGVTCIDTNECDIGNPCGNGTCTNVIGGF
ECACDDGFEPGPMMNCEDINECAQNPLLCAFRCVNVVGSYECKCPTGYVLREDKRMCRDQ
DECEDGIDDCESRGMRCKNLIGTYMCICNAGYTRQPNGEGCMDLNECVAKPGICKNGRCE
NTVGSYRCKCDQGYIANPSQTECIDNRQGFCFTEVLTTLCQMSSSNRNLVTKSECCCDGG
RGWGTNCELCPLPGTTQYKKMCPLGPGYTTDGRDIDECRVMGNLCKNGQCINTLGSYHCV
CKTGYTADIIATQCVDVDECIQAPKPCNFICKNTEGSYLCSCPRGYILQEDGKSCRDMDE
CSTKQHNCQFLCVNTIGGFTCKCPSGFTQHHSACIDNNECSTDPNLCGSNGMCQNTPGSF
NCDCQRGFSLDTAGQSCEDMDECDGNHRCQHGCQNLVGGYRCSCPQGYLQHYQWNQCVDE
NECLNSQICGGASCHNTLGSFRCLCPTGFNYEQINGGCSDVNECSTSHNPCKFGCSNTDG
GYLCGCPPGYFRAGQGHCVTGLGFTSSEGEGGDVDDNSLSPEACYECKINGYPKKGRKRR
STNSTQEELLENMQQLTEEDVLNLASVDVEDTLQFHLNISELSNRDHILEFTPALSTLSN
HVRYSIDHGNDEGYFKINQREGVSYLHLSKKRVLLPGTYDLQISSAPLYKKKELAELEDQ
HDKDYLTGQLGDILKMRVQLILH
NT seq
8712 nt
NT seq
+upstream
nt +downstream
nt
atgccggacagaaagcgcggaggacggccggcgcagctggcgcagctggccgcggctctg
ctggccctgctgtcgctctccggcctcggcctctccgcagatgtgctggacgccgcgaac
accgacctggtgaccaagcataacgacaccagagccagcagggccaagaggagggggggc
accgacgtcctcagaggacctaatgtctgtgggtcaaggaacaacgcctactgctgccca
ggctggaagactcttacgggaggaaaccagtgcattgttccgatctgcaggagttcatgt
ggagatggtttttgctccagacccaacatgtgcacctgccccaccggccagattgctgca
tcctgtggatccaagtcagtccagcactgtaacattcggtgtatgaacgggggaacatgt
gcagaggaccactgcaattgtcagaaaggctacgttggaaaccactgcggtcaaccggtt
tgtgaaaatggctgtctcaatggaggacggtgtgtgggacccaacagatgtgtgtgtaca
tacggcttcaccggggcccagtgtgagagagactaccgcaccgggccgtgcttcgcctcg
gtgaacaaccagatgtgtcaaggccagctcacgggcattgtgtgcacaaaaactctgtgc
tgcgccaccgtggggcgggcttggggtcacccctgcgagatgtgccccgctcagcctcac
ccctgccgaagagggttcataccaaatcaccgcaccggggcgtgccaagatgtggacgag
tgccatgccatccctggcatctgtcaaggaggaaactgcatcaacacagtgggatccttt
gaatgtaaatgccccgctgggcacaagttcaatgagatctcgcagaaatgtgaagatcta
gatgagtgcgcaaacgttccaggtctctgcggcgtgggtgaatgctcaaatactgttggc
agctatttctgcaagtgtccccaaggatattatacctctgttgatggctccaagtgtgta
gacgttcgtggcggctactgctacgccagcgtgctgaacgggcgctgtgccaaccagaac
tcccagctgatgactaagatgcagtgctgttgtgacagcgggcgctgctggtctgacggc
tccgctcctgagatgtgccccattcgtggaacagaggagtaccagagactgtgtatccag
atccctgaagccggcggggtagcgccggggccagggggtccggatgtccccggcatctac
ccgcttccataccctcgtccaggtcccggccaaggccccggccccggccccggcactggc
cttgggcctcgtcttttcccagaggtgattcccatccaaggtccattccaaacaccaagc
ccatatcctcggattccagatccacgccaaccaggcataatcctttcacagaatatcacc
aacacgtgccaggccttccgcaacctgtgcctgaacggcaggtgtatccccacagcaggt
attggatatcgctgtgagtgcaacatggggttcaagctggacgtcaggggcgagtgcatc
gatgaagatgaatgtgacaaaaagccctgtgcacacggagactgtgtgaacatgccaggg
tcttacatctgtcagtgtcctgctggattccagtcaacagcaactaggacagagtgtcga
gatctggatgaatgtgtggccaacggtcggatctgcaacaatggccgctgcgtgaacact
gacggcagcttccactgcgtctgcaatgctggatttgaaatttcaacagatggcaaaaat
tgtcaagaccaggatgagtgtctgatcaggaacatgtgcctcaatggattgtgcatcaat
gaagacggcagcttcaaatgcatctgcaaaccaggattcttgcttgactccagtgggcgc
atgtgtgtagacattgatgagtgtgagactccaggcatgtgtatgaacggccactgcatc
aacaccgagggatctttccgctgccagtgtatggctgggatggcagtgggcttggatgga
agaatctgtgttgacacgcacatgcgcagtacgtgttacggtggctacaagcgggggcag
tgtgttaggggattatttggagccgtgaccaagtcggagtgctgctgcgccagcacggag
tacgcctacggagagccctgccaaccctgcccgccacaaggctccgcggacttcctggct
ttgtgccccaacggcgtcggtacaaccggcgataaaagagacattaatgaatgtgccctc
gaccccgacatctgccagaatggagtgtgtgaaaacatgctgaggacttacaaatgcacc
tgcaacataggctttgaggtagacctgtcgggcaaaaactgtgtcgatattgatgagtgt
ctaatgaacaggctgctgtgtgacaacggtctgtgcaggaacacgcctggaagtttcacg
tgccagtgtccatcgggtttcctcttcgacccggaaacagatgtctgcgaggatgtggac
gagtgtgagtccaagccctgcatcaacggagtctgtgtgaacaggcagggatcctttgct
tgcgtgtgttcgacgggcagcgtcttggacaacactgggctggaatgtatagagacagcg
atgggcacctgctggctgaagataatcaacaatcgctgtgagatcaacatcaacggagcc
acgctcaagtctcactgctgcgccacactgggagaagcctggaacagcccatgtgctaaa
tgtgaaaaagatcccatctgtggtaaaggctttgccagagtgagaggaaataactgcgag
gatgtggacgaatgtcaagtttttcctggggtgtgcgtcaatggcaaatgcatcaacact
caaggctcctttttctgccagtgccctccaggaatgactgtcgatgtcagtgggaggacg
tgtatagacctgcggacggagcactgttacctcacccacgacgatgaccgctgtgggttg
cctatagcggggaagcaccgcgtggacgcctgctgctgctcagttggcgtggcctggggt
cccgaatgtgacgaatgtccagaaagcggcacgcccgaatacacccagctctgtcctcgc
ggtccaggcttctcgcataagggcgatttcatcaatggcaggccaatgctcaaagacatc
aatgaatgcaggatgatcaacagcctgtgctctaatgggaggtgcagaaacaccatcggc
agcttccgttgccgctgtgatagtggctatgcgctggactctgatgaaaggaattgcact
gacattgatgagtgccgcatctctccggacctgtgtggagagggaaggtgtgtcaatacg
cctggagattttgagtgcgagtgcttcgaaggttacgagagtggcttcatgatgatgaaa
aactgcatggacatcgatgagtgcgagaggaaccctctgctgtgccgtggcggtgactgt
gtaaacacagagggcagcttccagtgtttgtgcccacagggacacgagatcgcgcccgac
ggctcggcctgtctagatatcaacgaatgtgagttgagcgataggctgtgcaggaacggc
cagtgcatcaacatgatcggccgttaccagtgcagctgcaacacgggatacaaatccacg
gaagacaagctggaatgcatcgacattgacgagtgcacgatcgagaacggcggttgtgag
actttctgcaccaactcagagggcagctacgagtgcagctgccacagcggatacgctctg
atgcccgatttgagaagctgcactgatattgatgagtgcgaggagggccacgacatctgt
gatgggggccagtgcaccaacaccccggggacgtaccagtgcctttgcttcgatggcttc
atgtcatctgaggacatgaagtcgtgtctggatgtggatgagtgcgagctgaactcaaac
atctgtctgagtgggaactgtgagaacacgaagggatccttcatctgtcactgtgacctt
ggatactctgtgcgtaagggaaccacaggctgcacagatatcaatgagtgtgagatcgga
gcccacaactgcgacaaacatgcgacctgcaccaacacagcgggcagttttaaatgcaac
tgcgctctcggctggatcggcaacggcctcaaatgcacagacttggatgagtgttcgaac
gggacacacatgtgcagcaacaacgccgagtgtctcaacaccatgggttcctatcgctgc
gcgtgcaaggagggtttctccggagatggattcttctgctcagacagcgacgagtgtgca
gagaacgggaacctgtgtgaaaacggccactgtctgaatctgccgggcggcttccgctgc
gagtgtgacatgggctttatcgccacacctgacggcaaatcctgcgaagacatagacgaa
tgcaccttcgcaggcatctgtgtcaatggacggtgtcagaatatcccaggacttttcaga
tgtgaatgtaaccccggatatgaactggacaggagtgggggcaactgcacagatatcaat
gaatgtgcctacccgaccacctgtattaatggaatgtgtgttaacgtccctggaagttac
ctctgtaactgcccaccagattttgaactcaaccccactcgggtgggctgtgtagacact
cgctctggaagctgctacctggacgttcgtttccggggagatgcatcagagagtttggac
tgctccaacgagatcggcgttggagtttccaaggcatcctgctgctgctctttggggatg
ggctggggaaatccatgcgaacattgccccgctgtcaacacaactgagtacaagacgttg
tgtcctggaggagaaggcttcagaccaaacccaatcactgtcatcttggaagacatcaat
gagtgtcaggagctgccaggcttgtgccagggaggacagtgcatcaacaccttcggcagt
ttccagtgtgaatgtccaagaggctttgccctcaaccaggagaccagagtctgtgaagac
atcaatgagtgtgaacagccaggaatctgtggtccaggccagtgctacaacacgatcggc
aactacacctgtatctgccccgctgactacatgccggtcaacggagggaacaactgcatg
gacatgagaaagagctactgctacagaaacttttactcagacaatcagacatgtgacggg
gagctgaccttcaacatgacgaaaaagatgtgctgctgctcctacaacatcggccgtgca
tggaataaaccctgcgaacagtgtcccgttcccagcactgatgagtttgccaccctgtgt
ggcagtgagagaccaggatattatatcgacatcacaactgggcgggttattgatattgat
gagtgcagggaaatcccaggagtgtgtgagaacggggtgtgtatcaacatgattggcagc
ttcaggtgcgaatgccccatcggcttcatctacaatgacaagctgctgatttgtgaagat
attgatgagtgccaaaatgggccggtctgccagccgaatgcaaactgtctcaacacacct
ggaagcttccgctgcgactgtaaacctgggtatcgcttcactcccactggacagtgttta
gatcgtaacgagtgcctggagaaccctggcgtgtgcaaccctggtcagtgcattgacacg
ctggggagctatcgctgcatctgccccaacggctacaaaacaactcgggaccagtcgatg
tgcatcgatgtggatgagtgtgagagacagccctgtggcaacgggacgtgcaaaaacacg
gtgggctcctacaactgtctgtgctaccccggctttcagaactctcacaacggcgactgc
atagacatcgatgagtgcgcaacgcagaggggcttgtgtcgaaacgggcagtgtgtgaac
atggtgggcagcttcctctgtgtgtgtaatgacggctatgagctgacattggatggcaga
ctgtgtgcagatatcaatgagtgtgcagtgaatccaggaacatgtggcccaggaacctgt
ctgaatatggatgggtcttacaggtgtatttgcccaccaggctattatcttcatgaggaa
acttgtgaagatattaacgagtgctcccagtcgtccgagttgtgcacatttggcacctgc
tccaacactgaaggaagcttcacctgcttgtgtcccgaaggcttccagatctctgcctcc
ggacgcagatgtttagatgtccgtgtcaactactgcttcaccaagtttgaaaatggccgc
tgtctggctccgaagccccagaacacgtcgaaggaggcgtgctgctgcacgtcaatgcct
ggtcaaggttggggagacccatgtgaaatctgccccaggaaaggagaagacacatacgtt
gtcctctgtccgactgtgggatacgaacgtggacgagaaggcggaccaacagatattgat
gaatgcatcaatgatccatgtgttaatggccagtgcatcaacacagacggctccttccgt
tgtgaatgtcccttgggataccacctggatattagtggagtcacatgcatagacacaaat
gagtgtgacattggcaatccctgtggcaacggcacatgcactaatgtcatcggcgggttt
gagtgtgcgtgcgatgacggcttcgagcctgggccaatgatgaactgcgaagacatcaat
gagtgtgcccagaatcctctgctgtgtgccttccgctgtgttaacgtggtgggctcgtac
gagtgtaaatgccccacaggctacgtgctgcgtgaggacaagaggatgtgtcgagaccag
gatgagtgtgaagacggtatagatgactgcgagagcaggggaatgagatgcaagaacctg
atcggcacatacatgtgcatctgtaatgccggatacacacgccaacccaatggagagggt
tgcatggacctgaatgagtgtgttgccaaaccgggaatctgtaagaacggccgctgtgag
aacacagtgggaagctaccgctgcaaatgtgaccagggctacatcgctaacccctcgcag
acagaatgcattgataaccgtcagggcttctgtttcaccgaagtcctgaccactctttgt
cagatgagttccagtaacaggaacttggtgaccaagtcggagtgctgctgcgatggaggc
cggggctggggcaccaactgtgagctctgccctctgccagggaccacccagtacaagaag
atgtgcccacttggacctgggtacaccacagatggcagagacattgacgaatgtcgcgtg
atgggaaacctttgcaagaatggccagtgcatcaacactctgggatcctatcactgcgtc
tgcaaaactggatacactgctgacatcatcgccacacagtgtgttgatgtggatgagtgc
atacaggcaccaaaaccttgtaacttcatctgtaagaacacagagggaagctatctctgt
tcctgcccccgaggatacatcctgcaggaagatgggaagagctgcagagatatggacgag
tgttcaaccaaacagcacaactgtcagttcctgtgtgttaacaccatcggcggcttcacc
tgcaaatgtccttctggcttcacccagcatcactctgcctgcattgacaacaatgaatgc
tcaacagaccccaatttgtgtggctccaacggtatgtgccagaacactccaggcagcttc
aattgcgactgccagcggggattctcattagataccgccggacaatcttgtgaagatatg
gacgagtgtgacggaaaccataggtgtcagcatggatgccagaacttggtgggtggatac
aggtgcagctgtccccaaggttacctgcagcactaccagtggaaccagtgcgttgatgag
aacgagtgtctcaacagccagatctgtgggggagcgtcgtgccacaacaccctgggaagt
ttccgctgcctctgcccgactggcttcaattacgaacagatcaacggaggctgctcagac
gtcaacgagtgctccaccagtcataacccctgcaaattcggctgttcaaacacggacggg
ggttacctctgtggatgtccacctggatacttccgtgcgggacaagggcactgtgtcaca
ggtttgggcttcacaagcagcgagggggagggcggtgatgtggatgacaattcattgtca
cctgaagcctgctatgaatgcaagatcaacggctaccccaagaagggacgcaagcgtcgc
agtaccaactcaacacaggaggagcttctggaaaacatgcagcagctgactgaggaggac
gtgctcaacctggccagcgtggacgttgaagacactctccaattccacctgaacatcagt
gagctcagtaaccgtgaccacatcctcgagttcaccccagccttatccacactcagcaac
catgtgcgctacagcatcgaccacggaaatgacgaaggctacttcaaaatcaaccagagg
gagggtgtcagctacctgcacttgagcaagaagagggtcctcctgccagggacgtacgac
cttcagatcagcagtgcgcctctctacaagaagaaagagctagctgagctggaggaccaa
catgataaagactacctcacaggacagctgggagacatactgaagatgagggtgcagctc
atcctccattaa
DBGET
integrated database retrieval system