Cololabis saira (Pacific saury): 133460106
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Entry
133460106 CDS
T09849
Symbol
tiam1a
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04530
Tight junction
csai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133460106 (tiam1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133460106 (tiam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133460106 (tiam1a)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
133460106 (tiam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PH_10
PH_11
RNA_pol_Rpc82
PDZ_2
Motif
Other DBs
NCBI-GeneID:
133460106
NCBI-ProteinID:
XP_061596621
LinkDB
All DBs
Position
14:43025410..43109211
Genome browser
AA seq
1613 aa
AA seq
DB search
MGNVESQNGDAGFHGDGRGHLSRKQTSRSLRLSSKQPVTRRPRHSSTVKQEHRNSETSTR
SSSTPSIPQSLAENGLEIFSDADELGEFGANPHWTQRVAMTMRPESFQQDEDPPATPTPE
TSEADTVAQDGGEDSAGEAEAEGEDRYLQRMTEGSREGGNFKKKRSKSADMWREDSLEFS
LSDLSQEHLTSTEEMIDGGEEEEEEQFTCPRGNAGSAERASSLDQLCSQQSPGLRGKRSR
YVKGHRETACDGEGEDGLMSPAEDDGGGYGAFTLPCRRSHCLSEGLSGLGIPAAPRPAFQ
GRRAQTTQDISGVLGEGSEYGDSGIDGVAAEVDGELVSRRCKAMSASFSVYSATESSIFN
GSDSGSSSAGGGDGSRGGVYENFRKDLDSQVWRNQGRDGREEAGSGVSDERSSGALSGVF
PPDGAAAGAQGTVRKAGALAVKNFLVHKKNKKVEPATRRKWKHYWVSLKGCTLFLYESDG
RSAIDPASVAKHALWVENSIVQAVPEHPKKEFVFCLSNSVGDAFLFQTSGQTELENWITA
IHSACAAAVARQHRRDDTVRLLRTEIRKLEQKIDMDEKMKKMGDMQLSTVTDAKKRKTIL
EQIFLWEQNLERFHMDLFRCRCYLASLQGGEPPNPKRLLGFASRPTKLAMGRLGIFSVSS
FHALVSARAENSLRRRNQALPRTFSKRRSRFSSLWGLDTTSKRKSKGHPSVDQVFADHME
PLRKPLEQMFEDSTSDKSKQTEDSGKAVSQRGADADIWVPDHLQPSWVSLPNDRPVLAVV
RPGETALDVLDAVCKSHGLAPQGHHLRLKVWTDNQMLFYVPQSEEDVSDLLYKEIEICPR
ATRVIRFDRAESCSVGYGFSVAVLDEDGVQQLHITDVKEGGLAAAKGLRPGDELLFLNGK
PASELQTEDMRAAFVTPALTLSVSTLPQLSPRVLCCHPPRRSDGDPAAATDIFSQSQEDI
LDEVSGLTVEDESMEEGPRHLQSPGDEHRTVTTTGRKSTEQVTSFCRSLHDMNLLEGTTS
SSSSSSSSSLSPSPVSALPPSAQKQLSHADKLRKVIGELVETEKTYVKDLSCLIESYLTP
LQKESFLSRDELDVLFGNLGEMVEFQLEFLRTLEDGIRLVPDLDRLERVDQFKKVLFSLG
GSFLYYADRFKIYSAFCASHTKVPKVLAKAKTDPEFKAFLAERNPRQQHSSTLESYLIKP
IQRVLKYPLLLRELHSLTDPDSEEHYHLDVAMKAMNKVASHINEMQKLHEEFGAVFDQLI
NEQTGSKKEVSDLSMGDLLLHSTVTWVNPPPSLLKNKKEPELAAFVFKTAVVFVYKDCSK
HRRKMGGSHRVSVSDDKDPFRFRHMIATHSLQVCTAANSEASAVCEIVHSRSESEGRPER
SFQLSCSSPDSKKDFLRAVHSVLREKQRRQLLKTESLPPSRQYVPFGGRRLRVLKGARPG
MNRTESAPSRRLARRLRNRITIDTDLVFNGDDPAPPAAPGPPGPPGPPHPAPPAHKPPGE
DTDRWVEEQFNLAGYEEAAADGRRVQETDILSDDDEYCRSARLEAALGGLRLNPDPGQTR
GGAAPRDGPASCGASAAKPPPSRPFGGEGNAKERGAVWVRRDEFTDGCNSDIF
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgtggagagtcagaatggggacgctggtttccatggtgacgggaggggacat
ctctcccgtaagcagacgtctcgctcgctccgcctgtcgtccaagcagccggtgacccgg
cgtccgaggcactcgtccaccgtgaagcaggagcaccggaactccgagacctccacccgc
tcctccagcacccccagcatcccacagtccctagcggagaatgggctggagatcttcagc
gacgccgacgagctgggcgagttcggcgccaaccctcactggacgcaacgcgtcgccatg
acgatgaggccggagtccttccagcaggacgaggaccccccggccacgccgacccccgaa
acctcggaggccgacaccgtcgcccaggacggaggggaggactccgcgggggaggccgag
gccgagggggaggaccggtacctccagcgaatgaccgaaggatcccgggagggagggaac
tttaagaagaagcggtcgaagtcggcagacatgtggagagaagacagcctggagttctcc
ctgtccgatctgagccaggagcacctgaccagcaccgaggagatgatcgatggaggggag
gaggaggaggaggagcagttcacctgcccccggggcaatgcaggttcggccgagagggcg
tcgtctctggaccagctgtgcagccagcagagtccgggcctgcgggggaagaggagccgc
tacgttaaaggccaccgggaaacggcgtgcgatggcgagggggaggacgggctgatgtct
ccggccgaggacgacggcgggggatacggagccttcacgctcccgtgccgacgatcccac
tgtctctccgagggcctgtccgggctcggcatcccggcggcgccccgccccgccttccag
gggagacgggcgcagaccactcaggacatctccggcgtcctgggcgagggcagcgagtac
ggcgacagcgggatcgacggcgtggccgcggaggtggacggggagctggtgtcgcggcgc
tgcaaggccatgtccgcctccttctccgtctactccgccaccgagagcagcatcttcaac
ggcagcgacagcggcagcagcagcgccggcggcggcgacggcagccggggcggcgtgtac
gagaacttccggaaggacctggacagccaagtctggaggaaccagggccgggacggccgg
gaggaagccggctccggcgtgagcgacgagcgcagcagcggtgcgctcagcggcgtcttc
ccgcccgacggcgcggccgccggcgcgcagggaacggtccggaaggcgggagctctggcc
gtcaagaacttcctggttcataagaaaaacaagaaggtggaacctgcaacccgacgcaag
tggaaacactactgggtctccctgaaaggctgcacgctcttcctgtacgagtcggacggc
cgctcggccatcgaccccgccagcgtggccaagcacgcgctgtgggtggagaacagcatc
gtccaggccgtccccgaacaccccaagaaggagttcgtcttctgcctcagcaactcggtg
ggagacgctttcctgttccagacgtcgggccagacggagctggagaactggatcaccgcc
atccactcggcgtgcgcggcggccgtggcccggcagcaccgccgcgacgacacggtgcgg
ctgctccgcaccgagatccgcaagctggagcagaagatcgacatggacgagaagatgaag
aagatgggagacatgcagctgtccacggtgacggacgccaagaagaggaagaccatcctc
gagcagatcttcctgtgggagcagaacctggagcggttccacatggacctgttccgctgc
cgctgctacctggccagcctgcagggcggcgagccccccaaccccaagcgcctgctgggc
ttcgcctcccgccccaccaagctggccatgggccgcctgggcatcttctccgtctcctcg
ttccacgctctggtatcggcccgcgctgaaaacagcctccgccggcggaaccaggccctg
cctcgcaccttcagcaagcgccgcagccgcttctcctccctgtgggggctggacaccacg
tccaagaggaagagcaagggccacccctccgtcgaccaggtgtttgccgaccacatggag
ccgctcaggaaaccgctggagcagatgtttgaggactccaccagcgacaaatctaaacag
acggaggactctggtaaagctgtgtctcagcgcggggctgatgctgatatctgggtcccg
gaccatctccaaccctcctgggtgtctctgcccaacgaccggccggtgctggccgtcgtc
cggcccggagagacggccctggacgtgctggacgccgtctgcaagagccacggcctggcc
ccccagggccaccacctccggctgaaggtctggaccgacaaccagatgcttttctacgtc
ccccagagtgaggaggacgtgtccgacctgctctacaaggagatagagatctgcccccga
gcgaccagagtgatccggttcgacagagccgagtcctgcagcgtcggatacggtttctcc
gtggcggttctggacgaggacggagtccagcagcttcacatcaccgacgtgaaggaggga
ggtctggccgcggctaaaggtctgagacccggggacgagctgctgttcctgaacggtaaa
ccggcgtcggagctccagacggaggacatgagggctgcgttcgtcacccccgccctcacc
ctgagcgtcagcaccctgccccagctcagcccgcgggtgctgtgctgccacccgccccgc
cgctctgacggggacccggccgccgccaccgacatcttctcccagagccaagaggacatc
ttggacgaggtgtccggcctgacggtggaggacgagagcatggaggagggacctcgacac
ctgcagagccccggagacgagcacaggaccgtcacgacgacgggacggaagagcacggag
caggtcacctccttctgccggagcctccatgacatgaatctcctggagggaaccacgtcc
tcctcctcgtcctcgtcctcctcgtctctgtcccccagcccggtgtcggccctgccgccc
tcggcccagaaacagctctcccacgccgacaagctgcgtaaggtgatcggagagctggtg
gagacggagaagacctacgtcaaggacctgagctgcctgatcgagagctacctgacgcct
ctgcagaaggagagcttcctttcccgggatgagctggacgtcctgttcgggaacctgggg
gagatggtggagttccagctggagttcctgaggacgctggaggacgggatcagactggtg
ccggacctggaccggctggagcgggtggaccagtttaagaaggtgctgttctccctgggc
ggctccttcctctactacgccgatcgcttcaagatctacagcgccttctgtgccagccac
accaaggtccccaaggttctggctaaagctaagacggacccggagttcaaggccttcctg
gcggagaggaatccccggcagcagcactcgtccacgctggagtcgtacctgatcaagccc
atccagcgggtcctgaagtatccgctgctgctgcgggagctgcactcgctcaccgacccg
gacagcgaggagcactaccacctggacgtcgccatgaaggccatgaacaaggtggcgagt
cacatcaacgagatgcagaagctgcacgaggagttcggcgccgtgttcgaccagctcatc
aacgagcagaccgggagtaaaaaagaggtgtccgacctgtccatgggggatctgctgctt
cattccaccgtgacctgggtcaacccgccgccatcgctgctcaagaacaagaaggaaccg
gaactcgctgcctttgtgttcaaaacggccgttgtgttcgtgtacaaggactgctccaag
caccgcaggaagatgggtggatcccaccgcgtctccgtcagcgatgacaaggatcctttc
cgcttccgtcacatgatcgcgacccactctctgcaagtctgcaccgctgcaaactctgag
gcctcggcggtttgtgagatcgtccacagcaggtctgagtctgaaggccgtccggagagg
agcttccagctgagctgcagctctccggacagtaagaaggatttcctccgggccgtccac
tccgtcctgcgggagaagcagcgccggcagctgctgaagacggagtctctgcctccgagt
cgccagtacgtcccgttcgggggccgacggctacgcgtcctgaagggggcgcgacccggc
atgaaccggaccgagtcggctccgtcgcggcgtctggcccggaggctgaggaaccgcatc
accatcgacacggacctggtgttcaacggggacgacccggcccccccggcggccccgggc
cccccgggccccccgggccctccccatccggcccccccggcccacaagcccccgggggag
gacacggaccgctgggtggaggagcagttcaacctggcgggctacgaggaggcggcggcc
gatggccggcgcgtccaggagacggacatcctgagcgacgacgacgagtactgccggtcg
gcccggctggaggcggcgctgggggggctgcgcctgaaccccgacccggggcagacgagg
gggggtgcagccccgagagacggccctgcatcctgcggtgcttcagcggccaagcccccc
ccctccaggccgttcggcggggagggaaacgccaaggagcgcggtgccgtctgggtgcgg
cgcgacgaattcacggacggctgcaacagcgacattttctga
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