Cololabis saira (Pacific saury): 133460500
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Entry
133460500 CDS
T09849
Symbol
ext1c
Name
(RefSeq) exostosin-1c
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
csai01100
Metabolic pathways
Module
csai_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
133460500 (ext1c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csai01003
]
133460500 (ext1c)
Enzymes [BR:
csai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
133460500 (ext1c)
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
133460500 (ext1c)
Glycosyltransferases [BR:
csai01003
]
Glycan extension
O-Glycan
133460500 (ext1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
133460500
NCBI-ProteinID:
XP_061597066
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Position
15:22086996..22143725
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AA seq
740 aa
AA seq
DB search
MQARKKYVLLGLCACCWLVLVYWGGGAQLRLLHMLTRHRGDVVRPWPNWTDRVFLPRYAH
LDELQTDPGMAESPWQRRQAWTSIYKDSRCRMETCFDFSRCRHRGRDGFRVYVYPAEKSD
RVSESYRKILTSISESRYYTSDPREACLFVLGIDTLDRDQLSGQFVPNVDERIRGYPLWN
DGRNHLIFNLYSGTWPNYTEDLGFNVGQAILAKASLNSEHFRPGFDVSIPLFSRDHPQKG
GERGWLVRNSTPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSLTTCRHGKDWE
KHKDARCDHDNLEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACVPVLLSNGWE
LPFSDVIQWNQAVVEGDERLLLQVPSTVRSIRNQRVLAYRQKTQMLWDAYFSSVDKIVLT
TLEIIKDRVFSHTSRNKYMWNSLPGGLLVLPEYSTHLAHFPFYYLGLGVSPGQEFTAIIH
AVSPLVSQSQPVMKLLQVVSKSKYCSQIIILWNSEKPPPSRSKWPPTPVPLVVTDGRRKT
TSRFLPHVAIETEAVLSLDEDTVLLTSEVNFAFLVWWSFPERIVGFPPRSHFWDPLKHTW
GYTSKWTNDYSIVLTGAAFYHRYYHHLFSHYLPQSLRTLVDRTSNCEDILMNFLVSAVTH
LPPIKVAQRKQYKELPGPQGTRSAPWTNSEHFNQRQECVNTFANWFGYMPLVHSQFRLDP
VLFKDQVSVFRKKYKDLERV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgtaagaagtacgttctgctgggtttgtgtgcgtgctgctggcttgttctg
gtctactggggcgggggggcccagctccgcctgctgcacatgctgacacgtcaccggggt
gatgtggtgcggccctggcccaactggaccgatcgggtcttcctgccccgctacgcccat
ttggatgagctccagacagatccggggatggctgagtcgccatggcagcgccgccaggcg
tggacatccatctacaaggacagccgctgccgcatggagacgtgctttgacttctcgcgg
tgccggcaccgaggcagggatgggtttcgggtttatgtgtacccagcagagaagagcgac
cgggtgtccgagagctacaggaagatcttgacctcgatatcagagtcgcgctactacaca
tcagatccccgggaggcgtgtctgttcgtgcttggcattgacacattagaccgggaccag
ctttctggacagtttgttcccaacgtggatgaacgtatccgcggttaccctctgtggaat
gacggacgcaaccatttgatcttcaatctgtactcgggcacctggcccaactacactgag
gaccttgggttcaatgtgggccaggccatcctggccaaagccagcctgaactcagagcac
ttccggcctgggttcgacgtctccatcccgctgttctctagggaccacccacagaagggt
ggagagcggggctggctggtgaggaacagcaccccgccccgcaggaagtacctgcttatg
ttcaaagggaagcgttacctgacggggattggctctgacacccgcaatgccctccatcac
atccacaacgggaaggacattgtgtcgctgacgacctgtcgtcacgggaaggactgggag
aagcacaaagatgctcgctgtgaccacgacaacctggaatatgagaggttcgactaccag
gagctgctccacaactccaccttctgtttggttcctcgaggtcgacgtttgggctccttt
cgcttcctggagtctctgcaggcggcatgcgtccccgtgctgctgagcaacggctgggag
ctgccgttctctgatgtcatccagtggaatcaggcagtcgtcgagggggatgagaggctc
ctgctgcaggtgccgtccacagtgaggtccatcagaaaccagcgggtcctggcatacaga
cagaagacccagatgttgtgggatgcctacttctcttctgtggacaagattgttctgacc
acgctagagatcattaaggacagagtgttctcccacacctccaggaacaagtacatgtgg
aactcactgccaggaggtctgctggtcctgccagagtactccacacacctggcacacttc
cccttttactacctgggactaggagtcagtcctggtcaggagttcaccgccatcattcac
gccgtctccccattggtctcccagtcacagccagtcatgaagctgcttcaggtggtctcc
aagtccaagtactgctcacagatcatcatcctgtggaacagcgagaagccgccccccagt
cggagtaagtggccccccacgccggttcccctcgtggtgacggacggcaggaggaagacc
accagccgattcctaccccacgttgccatagagacggaggccgtgctgagtctggacgag
gacacggtcctgctgaccagcgaggtcaactttgccttcctggtgtggtggagcttcccc
gagcggatcgtgggcttcccgccccgcagccacttctgggaccccctgaagcacacctgg
ggttacacgtccaaatggaccaacgactactccatcgtcctgacgggagctgccttctac
cacaggtactaccatcacctgttctcccactacctgccccagtctctgcggaccctggtg
gaccggacctccaactgcgaggacatcttgatgaacttcttagtctctgctgtcactcac
ctgccgccaatcaaagtggctcagaggaagcagtacaaggagctgccgggtccacaggga
acgaggagcgccccctggaccaactcggaacacttcaaccagaggcaggagtgcgtcaac
accttcgccaactggttcggctacatgcctctggtccactcgcagttccgtctggacccg
gtgctcttcaaagatcaggtgtccgtcttccgtaagaagtacaaagacttggagcgtgtc
taa
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