Cololabis saira (Pacific saury): 133461975
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Entry
133461975 CDS
T09849
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133461975 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133461975 (c9orf72)
Membrane trafficking [BR:
csai04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
133461975 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
133461975
NCBI-ProteinID:
XP_061599022
LinkDB
All DBs
Position
16:complement(30692365..30712720)
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AA seq
462 aa
AA seq
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MSSGCPPQSPAVAKSEVAVDGECPLLAATFAYWDNILGPRVRHIWSPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQA
ELAFYLPLHTICVERLKHAIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKSHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAVSSHLQTCGCSVVVGSNPDKVNKIVRTLCLFLTPAE
RKCSRLCRSSSSFKYDTGLFIQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSALWKTDSEDDIPPDTVIHTDETFTPDLNIFQDVMHRDTLVKC
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLDL
AAEGDLNIIMALAEKLRAGLHSFVFGKPFYTSMQERDVLMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggctgtccaccacaatcaccagccgtggcaaagtctgaggtcgctgtagat
ggagaatgtcccctgctggctgccacctttgcctactgggacaacatcctgggtccacgc
gtgcgccacatctggtcaccaaagggcgaccagctgatgttcctcagcgacggagaggtc
acctttttagccaaccacacactcaacggggagattttacgaagtgctgagtgcggagct
gtggacgtgaagttttttgtcctggcagagaagggcgtcatcatcgtgtctctgatcttt
gatggcgagctgaagggcgataagaacacatgtgccttgtccataattctacctcaggca
gagctggccttctacctacctctgcacaccatctgcgtggagagactgaagcacgctatc
cgcaaaggacgcatttggatgcagaagggctataatatcatctcagtgctgagcttggag
attgtcccaataatggagctgctggcctcgatgaaatcacacagcgtgcctgaagatata
gacataaaagacaccgtgctaaatgatgacgacatcggcgacagctgccacgaggatttc
ctccacaaagccgtcagttctcacctgcagacgtgtggctgctccgtggtggttggaagc
aacccagacaaagtaaacaagattgtgcggacgctctgcctcttcctcaccccggccgag
aggaagtgctctcgcctctgcaggtccagctcttccttcaaatacgacaccggcctgttc
attcagggtctgctcaaggactccacaggcagcttcgttctgccgttccgccaggtgctc
tactcgccgtaccccaccacgcacatcgacgtggacatcaacacagtcaagcagatgccg
ccgtgccacgagcacacgtacaaccagcggcgctacatgcgctctgagctgagcgctctc
tggaagacggacagcgaggacgacatccctccggacacggtgattcacaccgatgaaacc
ttcacccccgacctgaatatattccaagatgtcatgcatagggacactttggtgaagtgt
tttattgatgaggtgttcatgctgaagccaggactgtccctgcggagcacctacctggcc
cagttcctgctgctgctccacaggaaggccctcacgctgctcaagtacattgaggacgaa
acgcaaaaaggcaagaagccattccgctcactgcgaaacttgaaaacggacctggacctg
gcagcggaaggagacctgaacatcatcatggcgttggctgagaagctgagggccggactt
cactcgtttgtgttcgggaagccgttctacaccagcatgcaggagcgggacgttctcatg
agcttctga
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integrated database retrieval system
