Cololabis saira (Pacific saury): 133462224
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Entry
133462224 CDS
T09849
Symbol
bcl11ba
Name
(RefSeq) BAF chromatin remodeling complex subunit BCL11B a
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133462224 (bcl11ba)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133462224 (bcl11ba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_16
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF4677
Zn_SUZ12
DUF3268
Motif
Other DBs
NCBI-GeneID:
133462224
NCBI-ProteinID:
XP_061599335
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All DBs
Position
16:42208266..42236038
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AA seq
841 aa
AA seq
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MLTLTFLFFFFCIPADHPDGAVLSDTPGPNPDLSPAHSLPPGHSLPPGHSLPPGLHPDHD
LLTCGQCQVTFPLGDILVFIEHKKKQCQTPPPGGCYDAKMDDGRGGGGGGGLMPGLHPFA
PRGAELRKALEPVEVGVQATPEDEEAAGRRRRDQNTPTRGICPKQENAVTGGEPSNYICT
SCKQPFSSAWFLLQHAQNTHGIRIYLESGSSCAALTPRLTLPPPPPMGHDSIAPSPLANF
LGDGSNPFHLLRMAAAPLLREPLREPPPPGFAENRLPPNTPPFLSPPPRHHHHLERLSAE
EMGLIAQHPSAFERVMRLTPMALESQSMDFSRRLRELAGNNATTTPPPLSLSPPGIRPMH
RLLNPNPFQTGHKSPFLSTPPPPLPALPPASTTPPQNPNKVKSCEFCGKTFKFQSNLVVH
RRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKVGGGIGGGGGSLTGRSDDGSSPEPG
TSDVTGEDGVKNRDADFHGEEEEEEEEEEEEEMENESRPESNFSMESEFYRNHRENGAKL
PPPPPTPSEENKMEKMVDNGGIGVIGGYNNLIVDNRKRMSFPKRVSGDEDSALERTPING
RNCGSGDSFSGLFPRKPTPIASPALSTASSKRIKIERDLDVAPPPLPPPPHIPSENVYSQ
WLVGYAASRHFIKDPFLGFSDSRQSPFACSSDEHSSENGSLRFSTPPDGDLLDGCTASGG
STPRPGGGAGTRPGSKDGSRRCDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYAC
AQSSKLTRHMKTHGQMGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLMTSEVKIEQAER
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgctaacgttgacgtttctcttcttcttcttctgtattccagcggatcatcccgatggc
gctgtgctgtccgacacgccgggcccgaacccggaccttagccccgcccactcgttgccg
ccgggccactcgttgccaccgggccactcgttgccgccgggcctccaccccgaccacgac
ctgctgacgtgcggccagtgccaggtcacgttcccgctgggcgacatcctcgtcttcatc
gagcacaagaagaagcagtgccagacgccgccgcccggcggctgctacgacgctaagatg
gacgacggccgcggcggcggggggggcggcggcctgatgccggggctccaccccttcgcc
ccgcggggggcggagctccggaaggcgctggagcccgtggaggtcggagtgcaggccacg
ccggaggacgaggaggccgcggggcggcgccgccgtgaccagaacacgcccaccagaggg
atctgccccaagcaggagaacgccgtgacgggaggcgagccgtccaactacatctgcacc
agctgcaagcagccgttctccagcgcctggttcctgctgcaacacgcccagaacacgcac
gggatccggatctacctggagtccgggtcgtcgtgcgccgcgctgacgccgcgcctcact
ctgccgccgccgccgccgatgggccacgactccatcgcgccgtcgccgctagccaacttc
ctgggcgacggcagcaaccccttccacctgctgcggatggcggcggcgccgctgctgcgg
gagccgctgcgcgagccgccgccgccgggcttcgcggagaaccgcctcccccccaacacg
ccgcccttcctcagcccgcccccccgccaccaccaccacctggagcgccttagcgccgag
gagatgggcctcatcgcgcagcaccccagtgccttcgagcgcgtgatgcggctcacgccg
atggcgctggagtcccagtccatggacttctcgcggcggctaagggagctagcgggcaac
aacgccaccaccacgccgccgccgctgtcgctatcgccccccgggatccggcctatgcac
cgattgctgaaccccaaccccttccaaacgggacacaagtcgccctttctgagcacgccg
ccgccgccgctgccggcgctaccgcccgctagcaccacgccgccgcagaacccgaacaag
gtcaagtcctgcgagttctgcggcaagaccttcaagttccagagcaacctggtggttcac
cggcgcagccacaccggcgagaagccgtacaagtgccagctgtgcgaccacgcctgctcg
caggctagcaagctcaagcgccacatgaagacgcacatgcacaaggtcggcggcggcatt
ggcggcggcggtgggtcgctgacgggccgatccgacgacggcagctcccccgaacccgga
accagcgacgtcaccggcgaggatggcgtcaagaaccgcgacgccgacttccacggcgag
gaggaggaggaggaggaggaggaggaggaagaggagatggagaacgagagtcggccggag
tccaacttcagcatggagtcggagttttaccggaaccaccgggagaacggtgccaagcta
ccgccgccgccgccaacgccgtcggaggagaacaagatggagaagatggtggacaacggc
ggcattggcgtcatcggcggctacaacaacctgatcgtcgacaatcgcaagaggatgtcc
ttccccaaacgggtttccggggacgaggactcggcgttggagcggacgcccatcaacgga
cgcaactgcggctccggcgactccttctcaggcctgttcccgcgcaagcccacgcccatc
gctagcccggcgctgtccaccgcctccagcaagaggatcaagatcgagcgggacctggac
gtcgcaccgccgccgctaccgccgccgccccacatcccctcggagaacgtttactcgcag
tggctagtgggctatgccgcctcgcgccacttcatcaaggacccgttcctgggcttcagc
gactcccgacaatcgcccttcgcctgctcgtccgacgagcactcgtcggagaacggcagc
ctgcgcttctccacgccgccggacggggacctgctggacggctgcacggccagcgggggc
agcacgccgcgccccggcggcggcgccggcacccggccgggatccaaggacggctcgcgg
cgctgcgacacctgcgagtactgcggcaaggtgttcaagaactgcagcaacctgacggtg
caccggcgcagccacaccggcgagcggccgtacaagtgcgagctgtgcaactacgcctgc
gcgcagagctccaagctaacgcgccacatgaagacgcacggccagatggggaaggaggtt
taccgctgcgacatctgccagatgcccttcagcgtctacagcacgctggagaagcacatg
aagaagtggcacggcgaacacttgatgaccagcgaggtcaaaatcgaacaggccgaacgg
gcgtaa
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