Cololabis saira (Pacific saury): 133463252
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Entry
133463252 CDS
T09849
Symbol
ggps1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
KO
K00804
geranylgeranyl diphosphate synthase, type III [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00900
Terpenoid backbone biosynthesis
csai01100
Metabolic pathways
Module
csai_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133463252 (ggps1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csai01006
]
133463252 (ggps1)
Enzymes [BR:
csai01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
133463252 (ggps1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
133463252 (ggps1)
2.5.1.29 geranylgeranyl diphosphate synthase
133463252 (ggps1)
Prenyltransferases [BR:
csai01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
133463252 (ggps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
133463252
NCBI-ProteinID:
XP_061600670
LinkDB
All DBs
Position
17:9757101..9785370
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AA seq
315 aa
AA seq
DB search
MDDPSETASNRILLEPYKYLLQLPGKQVRTKLAQAFNHWLNVPEDKLQVITEVTEMLHNA
SLLIDDIEDSSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPEAVQVFTRQL
LELHRGQGLDIHWRDTYTCPTEEEYRNMVLQKTGGLFGLAVGLMQLFSGWKQDLKPLLDT
LGLFFQIRDDYANLSSREYSEKKSFCEDLTEGKFSFPTIHAIWSHPESTQVQNILRQRTE
NMDIKRYCVDYLKTVGSFAYTRQTLRDLEAESYRLIRDLGGNPQLEGLIKHLSQMHHEAE
ATANANSEPNCSQSD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggacgacccctctgaaacggcttctaaccgaattttgctggaaccgtacaagtacttg
ctgcaactgccaggaaagcaagtaagaacaaaactcgcccaagcgtttaaccactggctc
aatgtcccagaagacaaactacaggtgatcaccgaggtgacggagatgctacacaacgcc
agcttattaatagacgacattgaggacagctccaagctccgccgaggtttccccgtggcg
cacagcatctacggcattccctcggtcatcaactcggccaactacgtctacttcctgggg
ttggagaaggtgctgaccctggatcaccccgaggcggtgcaggtgttcacccggcagctg
ctggagctgcaccgcggccagggcctggacatccactggagagacacctacacctgtccc
acggaggaggagtaccggaacatggtgctgcagaagaccggtggcctcttcggcctggcc
gtcggcctcatgcagctcttctccggctggaaacaggacctgaaaccgctcctggacaca
ctgggcctgttcttccagatccgcgacgactacgccaacctgagctcgcgagagtacagt
gagaagaagagtttctgcgaggacctgacggagggcaagttctccttcccaaccattcac
gccatatggtctcacccggagagcacgcaggtgcagaacatcctgaggcagcgcacggag
aacatggacatcaagcgctactgcgtggactacctgaagacggtgggttcgttcgcctac
acccggcagaccctgcgggacctggaggccgagtcctaccggctcatcagggatctgggc
gggaacccccagctggaggggctgatcaaacacctgagccagatgcatcacgaggccgag
gccacggcaaacgccaacagcgagcccaactgtagccaaagcgactga
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