Cololabis saira (Pacific saury): 133464007
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Entry
133464007 CDS
T09849
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
133464007 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133464007 (mmp2)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
133464007 (mmp2)
Peptidases and inhibitors [BR:
csai01002
]
Metallo peptidases
Family M10
133464007 (mmp2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
133464007
NCBI-ProteinID:
XP_061601907
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Position
2:42985603..43009103
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AA seq
660 aa
AA seq
DB search
MGFPTGFSSRRIVLKVFLVHFICFQATQARPSPIIRFPGDDTPKTDKEVALHYLNKFYGC
PQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVEIMKKPRCGVPDVANYNFFHRKPMWK
NKDITYRILGHTPDLDEEVINDAFFRAFKVWSDVTPLTFTRLMDGEADIMINFGRNEHGD
GYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEHWTLGDGAVVKVKFGNADGEFCKFPFLFM
GTEYNSCTSQGRDDGFLWCSTTYNFDEDAKYGFCPHELLFTLGGNAEGAPCKFPFNFQGE
KYDSCTTEGRDDGYRWCATTEDYDQDTSYGFCPQTAMSTVGGNAEGSPCAFPFTFLGDTY
DSCTTSGRSDGKMWCATSKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGAL
MAPVYTYTKDFRLPQDDINGIQELYGVGGGSRDQPLPPTQGPVTPMDLCKEPVIFDAVAQ
IRGETFFFKDRFLFRSVNFRSKPTGPMLVATYWPDLPARIDAAYENPVEEKTVFFAGNEM
WIYKADQLERGYPKRLTSLDLPSDLQQIDAAFSFRKNRKTYLFSGDKFWRYDEDAKRMDS
GFPKLIADSWNGIPDDIGAAFSLNGIDYSYFFKGNHYFKLEDNSLKIVKLGEITKDWLGC
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgggctttccgacgggattcagcagtcgtcggatcgttctcaaagtgtttttggttcac
ttcatctgcttccaagcaacgcaggctcgtccttctccgatcatccgattccccggagat
gacaccccaaaaacagacaaagaagtcgctctgcactatctgaataagttttatggatgt
ccacaagacagatgcaacctcatggtgctcaaagacaccttgaagaaaatgcagaagttc
ttctctctgcaagagactggagagatagatgccaaaaccgtggagatcatgaaaaagccc
cgctgtggcgtcccagatgtggccaattacaacttcttccacaggaaacccatgtggaag
aacaaggacatcacctacagaattctgggtcacacccccgacctggatgaggaggtcata
aatgacgctttcttcagagcctttaaagtgtggagtgatgtcacgccactcactttcacc
cggctcatggacggagaggccgacatcatgattaattttggtcgcaacgagcatggagac
ggttaccccttcgatggcaaggatggtctcttggctcatgcttttgccccagggccagga
atcgggggagactcccactttgacgacgacgaacactggacccttggagatggtgcagtg
gtgaaggtgaagtttggcaacgctgatggggagttctgtaaattccccttcctgttcatg
ggcaccgagtacaacagctgcacgtctcagggccgtgacgacggcttcctgtggtgctcc
accacttacaactttgatgaggatgccaaatatggattctgcccccacgaattgctcttc
accctgggaggaaacgcagagggcgctccctgtaaattccccttcaacttccagggcgag
aagtacgatagctgcaccaccgagggcagggacgacggttaccgctggtgtgccaccact
gaagactacgatcaggacacgtcctacggcttctgcccccagactgcaatgtcgacagtg
ggaggaaacgcagaaggaagcccctgcgccttcccgttcacctttctgggagacacctac
gactcctgcaccacctctggacgtagcgacggcaaaatgtggtgcgctacttccaagagc
tacgacgatgaccgcaagtggggtttctgtcctgaccaaggctacagtttgttcctggtg
gcggcccatgagtttggtcatgctctcggtctggagcactcccaggatcccggggcgtta
atggctcccgtctatacatacactaaagacttccggctccctcaagacgacatcaacggc
atccaggagctctatggtgtaggagggggttccagagaccagcctttgcccccaacccag
ggtcccgtcaccccaatggacctctgcaaagagccggtgatctttgatgccgtggcacaa
atccgaggggagacctttttctttaaagacaggtttttgttcaggtcagtcaacttcaga
agcaaacccactggcccgatgttagtggccacctactggcccgacctgcctgccaggata
gatgctgcctacgaaaacccggtggaggagaaaacagtcttcttcgcaggcaatgagatg
tggatttacaaagccgatcagctcgagagaggctatccaaagaggctcaccagcctcgac
ctcccctctgacctgcagcaaatcgatgctgccttcagcttcaggaagaacaggaagacc
tacctcttttccggggacaagttctggagatatgatgaagacgcaaagcgaatggactct
ggcttccccaaacttattgctgattcctggaacggcatcccagatgacatcggcgctgcc
ttcagccttaatggcattgattacagttacttcttcaaaggaaaccactatttcaaacta
gaagacaacagcctgaagattgtgaagttgggtgagatcacgaaggactggcttggttgt
tga
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