Cololabis saira (Pacific saury): 133464072
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Entry
133464072 CDS
T09849
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133464072 (ret)
04020 Calcium signaling pathway
133464072 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csai01001
]
133464072 (ret)
Enzymes [BR:
csai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
133464072 (ret)
Protein kinases [BR:
csai01001
]
Receptor tyrosine kinases (RTK)
RET family
133464072 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
RET_CLD1
Pkinase
RET_CLD4
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
133464072
NCBI-ProteinID:
XP_061602024
LinkDB
All DBs
Position
17:complement(14452932..14489353)
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AA seq
1110 aa
AA seq
DB search
MGSSCGFSRGNVAVPLLLLLFGGATGLYFPQKEYIETVYVDQPAGTPVLQVHAMLDADSE
RPHFYLCWSRRQSHNYWFHIDISTGVLFLNKTLEETDFALLYPTSPHPLSVKRILLHVMV
LNNVTKWSQCITKKPVQITLDFVNATIPQCDQSDMKELCFPHRDTSNPHIMENRFPGALR
QFRRLTRLNVCPNYTISYSVESETPAPFAVNENTTELVVTAPLDREESEVYRLLMVCWVR
TETLITTLKTSLDVYVDDEDDNAPYVNGTDTADVVISFNRARGGKFGTLSVFDRDLTTTF
PKEQSHNRYVETLLSTDPWIKETFDIKLKFNERKAARGIRESVHNYHLVLKRNLDVTENR
SVYLDYLVNDTTYPGVEGTVLLHFNVTILPVVLSFANVTPVFTVSRKASVYAQVGRVCVE
NCLQFDGIGVTYRLELPDKNVSADTLSCYAAVSITQAPDGIWGLLHVNDSKVLSRPECQD
LQYLVVAQEDFTQLETSTEILVVLTGAAFKTGQDSQELLSCAVNKLRGDCESTQGLGATT
GKCQWRQGKERGIAEDYSTCSPDLRTCPDSVCDAVESKDMSICPQDCTTVAAVGGYEPGL
SGKGIRACHGTCYCFDKCFCEKSNVAEVICDDMCKTIIATALLLSFIVSILLSSYFLHRY
HKNSPKPQISSAELTFRRPAQAYPISFPANNLRRGSTDSTETEIFKIPEDPKWEFPRKNL
VLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNH
PHVIKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGRDSNRNSSYLENPDDR
ALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS
YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLL
KTGYRMERPENCSEEMYNLMLRCWKQESDKRPTFSDISKELEKMMVKSRDYLDLAASTPA
DALLYDDALSEEDTPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWPEKSPVPLNRHDATN
PVFTRYANDSVYANWMALPSPAKAVDKLDS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggggtcaagttgtggtttctctcgtggaaacgtcgcggtgccgctgcttcttttgctt
tttggaggagcgacggggctgtacttccctcagaaagagtacattgagacggtgtacgtg
gaccagccggcagggacgccggtcctgcaggtccacgccatgctggacgccgactccgag
cggccgcacttctacctttgctggagcagacgtcagtcccacaactactggttccacata
gacatcagcaccggagtgctgttcttgaacaaaaccctggaggagacagacttcgccttg
ctatatccaacttctccacatccgttgtcggtgaagaggatattgctccatgttatggtt
ttaaataatgtcaccaagtggtcccagtgcatcaccaaaaaaccagttcagatcacgctg
gattttgtcaacgccacaattccccagtgtgatcagtccgacatgaaggagctctgcttc
ccacacagagacacctccaacccccacatcatggagaaccggttcccgggggccttacgt
cagttccgacgtctcacaagactcaacgtttgccccaactacaccatctcttacagcgtc
gaatcagaaaccccagcaccgtttgccgtgaatgaaaacaccactgagctggtggtgacc
gctcctctggaccgagaggaaagtgaggtctacagactcctgatggtttgttgggttcgg
acagaaaccctcatcaccacgctgaaaacctccctggatgtctatgttgacgacgaggac
gataatgctccatacgtgaacggcactgacactgcagacgtcgtcatcagcttcaatcgg
gcaagggggggaaagtttggcaccttgtccgtctttgacagggatttaaccacgactttt
ccgaaagagcagagtcacaataggtatgtggagacgttgctcagcacggacccgtggatc
aaggaaacatttgacatcaaattgaaattcaatgagagaaaagctgctcgtggcatccga
gagtccgtccacaactaccacctagtcctgaagaggaatctcgatgtgacggagaaccgt
agcgtgtatctggactacctggtcaatgacaccacctaccccggcgtggagggaaccgtg
ttgttgcacttcaacgtcaccattttaccggtcgtcctcagctttgccaacgtcaccccc
gtgttcacggtgtcacgcaaagcctctgtttatgcacaggttggcagagtctgtgtggaa
aactgcctgcagttcgacggcatcggggtcacgtaccgcctggagctgccggataagaac
gtgtctgctgacacgttgtcctgctacgctgccgtcagcatcacccaggctccagacggg
atctggggactgctgcatgtgaatgactccaaggtgctgtcccggcccgagtgccaggac
ctgcagtacctggtggtggctcaggaagacttcacgcagctggagaccagcacggagatc
ctcgtcgtcctgactggggcagcattcaagacgggtcaggacagccaggagctcctgtcc
tgtgctgtgaacaaactgcgaggcgactgcgagtccacccaaggcctgggggcaacgacg
gggaaatgccagtggaggcaaggcaaagaaagaggaatagctgaagattattccacgtgc
tcccctgatctgcggacctgtccggatagcgtctgcgatgcagtggaaagcaaagacatg
tcgatatgtcctcaagactgcacaacggtggctgcagtcggaggctatgaacccggcctg
agtgggaaaggcatcagggcctgccacgggacctgctactgcttcgataaatgcttctgt
gagaagtccaacgttgctgaagtgatctgtgatgacatgtgtaagactatcatcgccacc
gctctgctcctctccttcatcgtgtccatcctcctatcatcatacttcctccaccgctac
cacaagaactcgcccaagccccaaatatcgtcggcagagctgactttccgccggccggct
caggcgtatcccatcagcttccctgccaacaacctgcgtcggggctccacggactccacc
gagactgagatctttaagatacccgaggatccgaagtgggagtttcctcgtaaaaacctt
gtactcggcaagactttaggagaaggagagtttgggaaagttgtcaaggcaacggcattc
aggctgaaaggaaaagcaggatacaccactgtagctgtgaaaatgcttaaagagaatgct
tcacacagtgagctgcgggaccttctgtcagaattcaccctgctgaagcaagtcaaccac
ccacatgtcataaagatgtatggggcgtgcagccaggacggtccattgtatctcatcgtg
gagtatgccaagtatgggtcactgcgtaatttcctgcgcgagagccggaaagttggcccc
agctacatgggcagggatagcaaccgaaactccagctacttggagaaccctgatgacagg
gctctcaccatgggagacctgatctccttcgcatggcagatctccagaggcatgcagtac
ctggcagaaatgaagctcgttcaccgggacctcgcagcacgaaacgtcctggtggctgaa
ggacggaagatgaagatctctgactttgggctttcaagagatgtgtatgaggaggactca
tatgttaagaggagcaagggccgtatacctgtgaagtggatggcgattgagtccctgttt
gatcacatttacacgacacaaagtgatgtctggtcctttggtgtgctcttgtgggaaata
gtgacgctgggaggaaacccgtacccaggtattgctcccgaacgcttgtttaacctcctc
aagaccgggtacagaatggagagaccagagaactgctccgaggaaatgtacaacctaatg
cttcgatgctggaagcaagaatcagacaagaggcccacattctcagacatcagcaaagaa
ctggaaaagatgatggtgaaaagtcgggattacctggacctggcggcgtccactccggcc
gatgccctgctctacgacgacgccctctctgaagaggacactccactagtggactgtaat
aacgcccctctccctcgaaccctcccctccacatggattgaaaacaagctctatggcatg
tcatacccgaactggcccgagaagagcccggtaccgctcaacagacacgatgccactaat
ccagtctttacaagatatgccaatgatagtgtttatgcaaactggatggctttgccttca
cccgcaaaagctgtggacaagcttgatagctaa
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