Entry |
|
Name |
(RefSeq) RING-box protein 1a
|
KO |
|
Organism |
csat Camelina sativa (false flax)
|
Pathway |
csat04141 | Protein processing in endoplasmic reticulum |
|
Brite |
KEGG Orthology (KO) [BR:csat00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104706402
04120 Ubiquitin mediated proteolysis
104706402
09124 Replication and repair
03420 Nucleotide excision repair
104706402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:csat04121]
104706402
03400 DNA repair and recombination proteins [BR:csat03400]
104706402
Enzymes [BR:csat01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
104706402
Ubiquitin system [BR:csat04121]
Ubiquitin ligases (E3)
UBL E3 ligases
104706402
Multi subunit type E3
SCF complex
Ring finger protein
104706402
Cul2 complex
104706402
Cul3 complex
104706402
Cul4 complex
104706402
Cul7 complex
104706402
Cul8 complex
104706402
Cul9 complex
104706402
DNA repair and recombination proteins [BR:csat03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
104706402
TCR (transcription coupled repair) factors
Cul4-CSA complex
104706402
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
8:complement(6014900..6016529)
|
AA seq |
117 aa
MATLDSDVPMIPAGGASGSAASSSTKKPKRFEIKKWSAVSLWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH |
NT seq |
354 nt +upstreamnt +downstreamnt
atggcgactctagactccgacgttcctatgattcctgcgggaggagcctctggcagcgct
gcttcgtcttccacaaagaaacctaagcgattcgaaatcaaaaagtggagcgccgtttct
ctctgggcttgggatatcgttgttgacaactgtgcgatctgcagaaaccacatcatggat
ctctgcatcgagtgtcaagctaatcaggccagcgctactagtgaggaatgcaccgttgct
tggggggtttgcaatcatgccttccactttcactgcatcagcagatggctaaagactcgt
caagtttgtccgttagataacagtgagtgggagttccagaaatatggtcactaa |