Camelina sativa (false flax): 104706733
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Entry
104706733 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104706733 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104706733
03400 DNA repair and recombination proteins [BR:
csat03400
]
104706733
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104706733
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104706733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
FapA
YscO-like
Motif
Other DBs
NCBI-GeneID:
104706733
NCBI-ProteinID:
XP_019083921
LinkDB
All DBs
Position
8:complement(8545987..8570212)
Genome browser
AA seq
1581 aa
AA seq
DB search
MGSRRSVNRSLILSDDEDEDIFYSFKVLLPNGTSVKLTLSNPDPKMSMQNFVNLVKKEYD
NARKDCVLLSKRTRVDWNSGGKFSLESNGEKMSGVVRFAAFKPNICHIIRLDDGSGIAST
MYENLWDLTPDTDLLKELPENYSFETALADLIDNSLQAVWPYREGARKLISVDISADRIT
VFDTGKGMDSSEENSIDKWGKIGASLHRSQKTDAIGGDPPYLKPYFGMFGYGGPYASMFL
GRRTLVSSKTKESKKVFTLQFKKEALIDNRSILGKNWKTDGGMRDPSEEEIKLSPHGSFT
KVEIFESEFDISKIYQLQCRLKDIYFPYIQCDELSKTGRTERPVEFQVNGEDLAEITGGE
VAITNLHSTAQVYSFEIRFTLSGGKRKGTTQKANARPKFVYFPIVQGKESFEKILESLEE
EGCKVSESFQTFGRVSVRRLGRLLPEVRWDSIPFMVRGNRASTLQKGSRRVKCFVDLDAG
FSPTPSKTDLASQSPFTLALKNFGSKSKEKDNDVSCVLHREGKTLVFGQVDQDYKAWVLE
MHKTYDEEEASGEDDAVVIFDSLDNKALCISPDCEAVRVHSIMKRKGMSWKRGQKIRILK
GACGGVHKNDVYATIDYFLVEGFDDEAGGDAWIICRQINYSEDEGCLLSMTKGVSRLELR
SSSSFPISIIDSGMCLPLDETEWNRKIEKQREKDPSRIDLLDEKDCRALNIDGESSFGDT
VRAGETPPQQIVAVVRPASFTSSKVSKKLHQKHIVKMDGNMLMEVEFQDSNKNTKILYSH
DCFPTSCKGFHGLYIFPLESKLPDKFNKTGIYNFCFSIGKSITAKKKVLVEPSSKVGSWK
LASNLEFTQQYNVQVGSSLPPCSIACFDEYENQIPFTSVPTLEVELKASPGFERKIDMIE
ANLVDDGILKVENMLVETDSLDQIRPDYDATLKICSKDEPFSVSVACKINPGPMKRVVEM
YPEALENLLPDSTAQNYILEVFDGYNNHVAEGTNVLICTEGYCIKDSMGLHRKVDSCGCV
DLSGILQVTAGYGKSISLSVMSGTDEIFKKESIIEKRELRLLTKLPDCCTAGTNLTNLKF
KVTDSDGVIDTSIHHDENSGYFHTMSAESDSSSVESEVRYAFVHGFCKVSTVSLPKSEGD
FSFRVFHSRFPEIHMSLKIQLTPAQTFERDEIGCSTPYPRMSFTPQSKMASTTNSSVAPT
GQSPCSQFRVLNIKASSSTLGSQTGLMDMAQFTESLKEKLIRYSEHRVEVDERLKCLEAE
LNQAKEEFNTLQASLEALGATFPECLYTKESMMKQIEKKQHNTASSLFCYLYREAAPPRS
LLLSKKGLFGLVALLGSVASTSLSRVLSEYLGEDMMLALVCKSAQCGSSSAEYLRLQSEA
VRLGRSITNHRFHVLCLDAIRPWKDGILENDPQKKLAMDDPKLSDGDPIPGFKGYAVNMI
DLDTEELCIQTYSGYGLRETLFYHLFGNLQVYETQKQVEAALPHINGGGAVSLDGFIAKG
NEFIYSGCSKPEIHFPITVTENEEEKLRKLEAARDRVRMAAKKIEEEKCSLRKLEKKMKK
TNEAYHNATNSLELIQTLPPE
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcaggcgatcagtgaatagatcattgattctatctgacgatgaagatgaagat
atcttttacagcttcaaggttcttcttcctaacggtactagtgtgaaactcacacttagt
aacccagatcctaagatgtctatgcaaaactttgtcaacctggtgaagaaggagtacgat
aatgctaggaaagactgtgttttgctgtctaagaggaccagggttgattggaactcaggc
ggaaagttttctcttgagtcaaatggcgagaagatgagtggcgttgttcgttttgctgcc
tttaagccgaacatttgtcatataatacgccttgatgacggttctggtatagcttccacc
atgtatgagaacttgtgggacttgacacctgatactgatctgcttaaagaactacctgaa
aattatagctttgagacagctctcgcggatctgatagacaattccttgcaagctgtgtgg
ccttatcgtgaaggagctcggaaactgattagtgtggatatttctgctgaccggattaca
gtctttgataccgggaaaggaatggacagtagtgaggaaaattctattgacaaatggggt
aagattggggcgtcattacatagatctcaaaaaaccgatgctattggaggcgacccacca
taccttaagccatactttgggatgttcggatatggaggaccttatgcttctatgttcttg
ggaaggcgtactttggtgtcttctaagacaaaagagtccaagaaagtattcactttgcag
tttaagaaagaagccttgattgacaatcggtctatattgggaaaaaactggaagactgat
ggtggcatgagggacccatctgaggaggaaattaagttatcgcctcatggaagctttaca
aaggttgagatatttgaatcagaatttgacatctccaaaatatatcaactccagtgcagg
cttaaggatatttactttccttacatccagtgtgatgaactctccaaaactgggagaact
gaaaggcctgtagagtttcaggtcaatggggaagatttagctgagataacaggtggagag
gtcgccattaccaacctacactccacggctcaagtatattcgtttgagattcgattcact
ctctccggtgggaaaagaaaagggacaacccaaaaggcaaacgctcgcccgaagtttgtt
tattttccaatcgtccagggaaaagaaagctttgagaaaattttggagagtttagaagag
gaaggatgcaaagtttctgaaagcttccaaacttttggtcgtgtttcagtaagaaggctt
ggtcgtctacttccagaagtccgttgggattcaataccgtttatggtgagaggaaacaga
gcgtctactttgcagaaaggctcccgaagagtaaaatgctttgttgatttggatgctggt
tttagcccaacgccctccaaaaccgatcttgcaagtcaaagccccttcactttggctctg
aaaaactttggtagtaaatcaaaggagaaggataacgatgtcagttgtgtactacataga
gaaggaaaaactttagtatttgggcaagtggaccaggattataaggcttgggttcttgag
atgcataagacttatgatgaagaagaggcgtcaggtgaagacgacgcagtcgttattttc
gattccttggataacaaagctctttgcatttcgcctgattgtgaagctgtgagggtgcac
agtattatgaagagaaaagggatgtcatggaagcgtggacagaagatcaggattctgaaa
ggtgcatgtggaggggttcacaagaatgatgtctatgcgacaattgactattttctcgtt
gaaggtttcgacgacgaagcaggcggtgatgcctggattatatgcaggcaaatcaattac
tctgaagatgagggatgccttctttcaatgactaaaggagtttcaagattggaactacga
agttcttcatcttttccaatcagtattattgactctggaatgtgtctacctttagatgaa
actgaatggaatagaaaaattgagaagcaacgggaaaaggatccatcgagaattgatttg
ctggatgagaaagattgcagagcactgaacattgatggggaatcatcatttggtgataca
gtgcgtgctggagaaactcccccgcaacagattgttgcagttgttcgacctgctagcttc
acatcttcaaaagtgtcgaaaaagttgcatcagaaacatattgtgaagatggatggaaac
atgctcatggaagtagaatttcaagattcgaataagaataccaaaattttgtattcacat
gactgttttcctacatcctgtaaggggtttcatggtctctacatctttccacttgagtca
aagctccctgacaagttcaataaaactggcatttacaatttttgtttctctattggaaaa
tcgattaccgctaagaaaaaggtgctcgttgaaccgtcttcgaaggtgggaagttggaaa
cttgcttctaatcttgagttcacgcagcagtataatgtccaggtgggttcttcacttcct
ccttgctctatcgcttgctttgatgaatatgaaaatcagataccattcacttctgttcca
actctcgaagttgaactgaaagccagccccggattcgaaagaaagattgatatgattgag
gccaacctggtagatgatggaattctcaaagtcgagaatatgctcgttgagactgatagc
ttagatcagatcaggccagattatgatgcaaccttaaagatatgctcaaaggacgaacca
ttttccgtctcagttgcgtgtaaaattaatcctgggcctatgaagcgtgttgttgagatg
tatccagaggctttggaaaatttgcttccagattctactgctcaaaattatatcttggag
gtgtttgatggatataataaccatgttgcagaagggaccaatgttctgatttgcactgag
ggctattgtatcaaagactcgatgggcttgcaccgaaaggttgatagttgtggctgcgtt
gatctgtctggaattctccaagtaacggccggctatgggaaatctatatcactctcggtt
atgtctggtactgatgagatcttcaagaaagagtctataattgagaaacgagagctcagg
ctcttaacaaagctgcccgactgctgtactgctggtacaaatcttacaaacctcaaattc
aaagtgacggattcagatggtgttattgatactagtatccatcatgatgaaaattctgga
tattttcataccatgagcgccgaatctgattcaagcagtgttgagagtgaagtcagatat
gcatttgttcacgggttctgcaaagtttctacagtttccctacctaaaagcgagggtgac
ttttctttcagggttttccattctcgatttcccgagattcatatgagcttaaagattcag
ctaacgcctgctcaaacatttgaaagagatgagattgggtgttctacaccttatccaagg
atgagtttcacacctcaatcaaagatggcttcaaccacaaattcatcggtggctccaact
ggacaatctccatgttcacagtttagagttttgaacattaaggcatcgtcatcgactctc
ggtagccaaactggcctgatggatatggcacagttcactgagagcttaaaagaaaaactc
attagatacagtgaacacagagtggaagtagatgagcgtctaaaatgtttggaagctgaa
ctaaaccaggctaaggaagagtttaataccttgcaagcttcgctggaagctctcggtgct
acgttcccagaatgcctatacaccaaagaatcaatgatgaaacagattgaaaagaagcaa
cataacactgcatcatcgcttttctgttatttgtacagagaggctgcccctccgcggtca
ctgcttctgtcaaagaaaggattgtttggccttgtagcacttcttggttcggttgcctcc
acctcccttagcagggtgttgtctgaatatttgggagaagacatgatgctcgctttggta
tgcaaatcggcacaatgtggctcgagtagtgctgagtatctcaggcttcaatctgaagca
gttagacttggaagatctataaccaatcatcggtttcatgttctatgtcttgatgcaatt
agaccttggaaggatggaattttggagaacgatcctcagaagaaattagccatggatgac
ccgaaactgtccgatggagatcccataccgggtttcaaaggctatgccgtgaacatgatt
gatttggatacagaggagctctgtatacaaacatactcaggatacggtctcagagagacg
ttgttctaccatctctttgggaatttacaggtatatgagactcaaaagcaagttgaagca
gctcttccacatatcaatggtggtggtgcagtctctttagatgggtttatcgcaaaagga
aacgaattcatatattctgggtgcagcaaaccggaaattcatttcccgatcacagtaacg
gagaatgaagaagagaagctgagaaaattggaagcagcaagagacagagtgagaatggca
gcgaagaagatagaggaggagaagtgctcattgcgtaagttagagaaaaaaatgaagaaa
acaaatgaagcttatcacaatgcaacaaactctttagagctaatccagactctgccccct
gaatga
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