KEGG   Camelina sativa (false flax): 104734230
Entry
104734230         CDS       T05044                                 
Name
(RefSeq) ABC transporter I family member 20 isoform X1
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104734230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104734230
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     104734230
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_15 AAA_29 AAA_23 ORC-CDC6-like Arf nSTAND3 AAA AAA_30 Zeta_toxin AAA_22
Other DBs
NCBI-GeneID: 104734230
NCBI-ProteinID: XP_010452059
LinkDB
Position
13:complement(522665..524794)
AA seq 327 aa
MAVTEEEKRNSTVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGK
TTILRILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGEWRRDVAFAGFEVPIQMD
ISAEKMIFGVAGIDPKRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGLLKPFKVLLLD
EITVDLDVLARADLLQFLRKECEERGATIIYATHIFDGLEDWPTHIVYVANGKLQLALPM
EKVKETSKKSLMRTVESWLRKERDEERKRRKERKANGLPEFESRAEESRVTGDPARMLNN
GWAAGRLHSTVKGGEDNFVLSSNRVLR
NT seq 984 nt   +upstreamnt  +downstreamnt
atggcggtgacggaagaagagaagcgaaactcgacggttgagatctccgggttacgtttc
acgtatcctggaatcgacggtcatccacctccgggatctaaaccacttattgaagatttc
tcaatcacgctcaattccagcgatcgttgtctcctcgtcggatctaatggcgccgggaaa
acgacgattctgaggatattgggagggaaacatatggtggagcctcacatggttagggtt
ctgggtcgctctgcgtttcacgataccggattgacatcttctggtgatctttgctatctt
ggtggcgagtggaggcgtgatgttgcatttgcaggatttgaagttccgattcaaatggac
atttcagctgagaaaatgatatttggagtggctggtattgatcctaagagacgagatgag
ttgatcaaggtgttggatattgatatctcatggagattgcacaaggtatcagatggccaa
agaagacgtgtccagatttgtatgggactcctcaagccattcaaggttctccttttagat
gaaataactgttgaccttgacgttctcgcaagagccgaccttttgcaatttctaagaaag
gaatgtgaagaacgaggagcaaccataatctacgcgactcatatatttgatggcctagag
gattggccaacacacattgtgtatgtagctaacgggaaattgcagttagcattgccaatg
gagaaagtgaaggagacaagcaagaagtcattgatgagaacagttgagagttggctcagg
aaagaaagagatgaagagaggaagagaagaaaagagaggaaagcaaatgggcttccggaa
tttgaatcacgggctgaagaaagccgtgtaacgggcgatccagcgcgaatgctgaacaat
ggatgggcagctgggagacttcactctacggttaaaggcggtgaggataatttcgtttta
agctcaaacagagttctaagataa

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