Camelina sativa (false flax): 104738142
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Entry
104738142 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104738142
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104738142
03400 DNA repair and recombination proteins [BR:
csat03400
]
104738142
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104738142
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104738142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
Nup49_C
TMPIT
CENPH
DehI
Crescentin
Motif
Other DBs
NCBI-GeneID:
104738142
NCBI-ProteinID:
XP_019090566
LinkDB
All DBs
Position
13:complement(11323506..11332818)
Genome browser
AA seq
1348 aa
AA seq
DB search
MFGYGGPYASMFLGRRTLVSSKTKESKKVFTLQFKKEALIDNRSILGKNWKTDGGMRDPS
EEEIKLSPHGSFTKVEICESEFDISKIYQLQCRLKDIYFPYIQCDELSKTGRTERPVVFQ
VNGEDLAEITGGEVAITNLHSTGQVYSFEIRFTLSGGKRKGTTQKANARLKFVYFPIVQG
KESFERILESLEEEGCKVSESFQTFGRVSVRSLGRLLPEVRWDSIPFMVRGNRASTLQKG
SRRVKCFADLDAGFSPTPSKTDLASQNPFSVALRNFGNKPTEKEKDDDVSFEIYKDGKNV
SYAQVDDNFRDWVMKMHDTHDEEAASGEDEAVLIVGSLDKKALVISRDAVRVHKVVTRKG
MSWKRGQNIKILRGACAGVHNNNVYATIDYFLIEGFEDEAGGDTRILCRPIDRPESEGCK
LSIVGGISKLEIGRSLSLPITIIDSGKCLPVDANEWNRKLEKQQEKAPSKIDLLDERDCR
ELGIDGELPVGDSVRAGRAPPKQIVAVVRPACFTSSTPSKKLDQLKLEQKHIVKMDEEMV
MVVKLLDTNMKPSDKNVKPVFSQRLCPTSRKGISGLYIFSLGSKLPNLFKKAGTYKFSFS
IGNSIKCNKTVVVRPSSKVARWELDDNLESLPCNVQVGSSLPPFRITCFDEYKNRIPFTT
VPSLEVELEANPRFLLKIDQIEANLIDSGSILKIENMLVETGELDQIRPTYEATLEIRAM
DKPFSISVACKVNPGPPERVAVNNPKALDNLLPGSTVEDFILEIFDGYNNHVAEGTDVLI
HIDGYRIEDWMGVNRKVDGRGCIDLSGLLKVTEGYGKSVSLSVIYGNEVIFRKESQIEER
ELRLVTELPEYCAAGSNPVNLIFQVTDSEGSLDTSIHHDEKSGWFHTMSIESDSSSVESA
IRYAFVHGSCRVPYLYLPENEGVFAFRVFHSRYPELHLSLKTQVTSASTFEREETSTPYP
RTTTPPESGIPLITNPGLTPCSQIGVLAIRSSSLALSSQTGLMDMAEYAESLREKIKTYE
ENRFEVDQHLKGLQAEHEHAEQELSALQASLETLGASFPECLSTKESMMNQIEEKHHDTA
ASVFCCLYREAPPPQSFFLSNKGMFGVVALLGSVASTSLSRVLSEYLGKDTMLSLVCKSS
QFGQKSDEYRKLQSEAASHGRTITNRFLVICLDATRPWRNGLVKNDPQKRLAMDNPYLPN
GDPIPGFKGYAVNMIHLNSEELDIQSNSGHGLRETLFYGVFGELQVYETAEDLEAALPHI
NGDAVSLDGVIARENGFIYSGCCTPEVHFPITVTEKQEKALVRIEIARGKKRKAEKEITE
GKCKMRKLVKKLKKATEKYQHLPATADS
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgttcggatatggaggaccttatgcttctatgttcttgggaaggcgtactttggtgtct
tctaagacaaaagagtccaagaaagttttcactttgcagtttaagaaagaagccttgatt
gacaatcggtctatattgggaaaaaactggaagactgatggtggcatgagggacccatcg
gaggaggaaattaagttatcgcctcatggaagctttacaaaggttgagatatgtgaatca
gaatttgacatctccaaaatatatcaactccagtgcaggcttaaggatatttactttcct
tacatccagtgtgatgaactctccaaaactgggagaactgaaaggcctgtagtgtttcag
gtcaatggggaagatttagctgagataacaggtggagaggttgccattaccaacctacac
tccacgggtcaagtatattcatttgagattcgattcactctctccggtgggaaaagaaaa
gggacaacccaaaaggcaaatgctcgcctgaagtttgtttattttccaatcgtccaggga
aaagaaagctttgagagaattttggagagtttagaagaggaaggatgcaaagtttctgaa
agcttccaaacttttggtcgtgtttcagtaagaagccttggtcgtctacttccagaagtc
cgttgggattcaataccgtttatggtgagaggaaacagagcgtctactttgcagaaaggc
tcccgaagagtaaaatgctttgctgatttggatgctggttttagcccaacgccctccaaa
accgaccttgcgagccaaaatcctttctcagtagctctaagaaactttggtaataaaccg
acggagaaagagaaggatgatgatgtgagctttgagatatataaagacggaaagaatgtc
agctacgcacaagttgacgataattttagagattgggttatgaagatgcatgatacccat
gatgaagaagctgcatcgggtgaagatgaagctgtccttattgttggatcactggataaa
aaggcccttgtcatttcgcgtgatgctgtgagggtgcacaaggtagttacgagaaaagga
atgtcatggaaacgtggtcagaatataaagattctgagaggagcttgtgctggggttcac
aataacaatgtgtacgccaccattgactattttctaatagaagggtttgaggacgaagca
ggcggggatactcggattttatgcaggcctatcgatcgccctgagagtgagggatgcaag
ctttcaatcgtcggtggaatttcgaaactggaaattgggaggtctttatctttaccaatt
actataatcgactctggaaagtgcctacctgtcgatgcgaatgaatggaatagaaaactt
gagaagcaacaggaaaaggcaccgtcaaaaattgatttgctggatgagagagattgcaga
gaattgggcattgatggggaattaccagttggtgattccgtgcgtgctgggcgagctccc
ccaaaacagattgtagcagttgtccgacctgcatgcttcacgtcttcaacaccgtccaag
aagttggaccagttgaagttggaacagaaacatattgttaagatggatgaagaaatggtc
atggtagtaaagttgctagacacaaatatgaaaccgagtgataagaatgtcaaacctgtg
ttttcgcagcgcttgtgtcctacatctcgtaaagggattagtggtctctacattttttca
cttgggtccaagttaccgaaccttttcaagaaagctggcacttacaaattttctttctcc
attggaaattcgattaagtgcaacaaaacggttgttgttaggccttcttcaaaggtagca
aggtgggaacttgacgataatctggagtcccttccatgcaatgttcaggtgggttcttct
cttccaccattccgtatcacttgctttgatgagtacaaaaaccggatcccgttcactact
gttccaagcctggaagttgaactggaagctaaccctagattcctactcaagattgatcaa
attgaggcgaacctgatagatagtggatcaattcttaaaattgagaatatgctcgttgag
actggtgagttagaccagatcaggccaacttacgaagcaaccttagagatacgcgcaatg
gacaagcctttttctatctcggttgcttgtaaagttaatcccgggcctccggaacgagtt
gctgtgaataatcccaaggctttggataatttgcttcccggttctactgttgaagatttt
atccttgagatattcgatggatataataaccatgttgcagaggggaccgatgttctgata
catattgatggttaccgtatcgaagactggatgggcgtcaaccgtaaggttgatggtcgt
ggctgcattgatctctctggccttcttaaagtcacagaaggctatgggaaatctgtatca
ctgtccgtaatatatggtaatgaagttatcttcaggaaagagtctcaaattgaggaacga
gagctaaggcttgtaacagagctgcccgaatactgtgctgctggttcaaatcccgtgaac
ctcatcttccaagtgacggattcagagggttcgttggatactagcatccatcatgacgaa
aaatctgggtggttccatacaatgagcattgaatctgattcaagtagcgttgagagtgca
atcagatatgcctttgtccatggatcctgcagagttccttatctttatctcccagagaac
gagggtgtctttgctttcagggtgttccattctcgatatcctgagctacatttgagctta
aagactcaagtaacatctgcttccacatttgaaagagaagagacttcaacaccttatcca
aggacgactacaccacctgaatcaggaatccctttaatcacaaatccagggctgactcca
tgttcacagattggagtgttggccattaggtcatcttcattggctctcagtagccagact
ggcctgatggatatggcagagtacgctgagagcttaagagaaaaaatcaagacatacgaa
gaaaaccgatttgaagtagatcagcacctaaaaggtttgcaggctgaacatgaacatgct
gagcaagagttgagtgcactgcaagcttctctggaaactcttggtgcatcgttcccagaa
tgcctatccacaaaagaatctatgatgaatcaaatcgaagagaagcatcatgacactgca
gcatcggttttctgctgtctgtacagagaggctccgcctccacagtctttttttctgtca
aacaaaggtatgtttggcgttgtagcgcttctcggttcagttgcctccacctcccttagc
agggttttgtctgaatatttggggaaagacacaatgctttcattggtgtgcaaatcatca
caatttggacaaaaaagcgatgagtatcgcaagcttcaatctgaagcagctagccacgga
cgaactatcaccaatcggtttcttgttatttgtcttgatgcaaccagaccttggaggaat
ggacttgtgaagaatgatcctcagaagagattagccatggataacccttacctgccgaat
ggagatcctattcccggtttcaaaggctacgctgtgaacatgatacacttaaattcagag
gagttggatatacaatcaaactcgggtcatgggcttagagagacgctattctatggagtt
tttggagagttgcaggtatatgagaccgcagaggatctcgaagcagctcttcctcacatc
aatggagacgctgtgtctctagatggtgtgatcgccagagaaaacggtttcatatactct
ggttgctgtacaccggaagttcattttccaataaccgtaacggagaagcaagagaaggca
ttggtgcgaatagaaatagcaagaggcaaaaagagaaaggctgagaaggagatcaccgag
gggaaatgtaagatgcgtaagttggtgaaaaagttgaagaaggcaacggagaagtaccaa
cacttaccagctacggcagactcttag
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