Camelina sativa (false flax): 104738895
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Entry
104738895 CDS
T05044
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104738895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104738895
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104738895
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
AAA_25
ORC-CDC6-like
AAA_28
NACHT
AAA_15
AAA
AAA_23
AAA_18
AAA_5
SMC_N
SRP54
AAA_30
PduV-EutP
AAA_33
Zeta_toxin
AAA_24
DLIC
AAA_22
Arf
AAA_16
VapE-like_dom
AAA_14
AAA_13
Motif
Other DBs
NCBI-GeneID:
104738895
NCBI-ProteinID:
XP_010457410
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All DBs
Position
14:1350352..1353402
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AA seq
291 aa
AA seq
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MAEEKDATASGDDAIKVSGMQFAYEVEDPIFFDFNLDLPAGSRCLLVGANGSGKTTLLKI
LAGKHMVGGKNVVQVLSRSAFHDTQLVCSGDLSYLGGSWSKTVGSAGEVPLQGDFSAEHM
IFGVEGIDPVRREKLIDLLDINLQWRMHKVSDGQKRRVQICMGLLHPFKVLLLDEVTVDL
DVVARMDLLKFFVEECDQRGATIVYATHIFDGLETWATHLAYIQDGELNGLSKMADIEEL
KSAPNLLSVVESWLRSEIKVVKKKKKPVAAWKPSPLDNSPFRSSRHMAYYR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggagaaagatgcgacggcgagtggcgatgacgccattaaagttagcggtatg
cagtttgcatacgaagttgaggatcctatattcttcgacttcaacctcgatctcccagct
ggctctcgctgccttctcgttggtgccaatggatctggcaagacaaccttattgaagatt
ttggctggaaaacatatggtgggaggaaaaaacgttgtacaagttcttagccgctcggct
ttccatgatactcaacttgtttgcagtggtgacttgtcttatcttgggggatcgtggagt
aaaaccgttggttcagctggcgaggttcctctccaaggagacttttcagcagaacatatg
atatttggagttgaagggattgatcctgtaagaagagaaaaattgatcgatcttcttgat
attaatcttcaatggcgtatgcataaggtttctgatgggcagaaacggcgagtgcagata
tgcatgggactcttacatccattcaaggtattattacttgatgaggtcactgtggaccta
gacgtcgttgcaaggatggatttgttgaaattcttcgtagaagaatgtgatcagagagga
gctacgattgtatatgcaactcacatattcgacgggttagagacatgggcgacacatttg
gcatatattcaggacggtgagctaaatggtttatcgaaaatggcagatattgaggagctg
aaaagcgcacccaacctcctctccgtggtagaatcttggctccggtctgaaatcaaagtc
gtgaagaagaagaaaaagcctgtggcagcatggaaaccgtctccactcgataactctcct
ttcaggtcatcaagacacatggcttattaccgatga
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