Camelina sativa (false flax): 104739545
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Entry
104739545 CDS
T05044
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
csat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104739545
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104739545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104739545
Transcription factors [BR:
csat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104739545
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104739545
NCBI-ProteinID:
XP_010458240
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Position
14:4109121..4113831
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AA seq
533 aa
AA seq
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MPLFELFRLTQAKLESAQDNNSSPPMDEVVELVWENGQISTQSQSNRSRNIPPPQAVHQP
NSLRARDIGNGSKATMVDEIPMSVPSLMTGLSQEDDFVPWLNHNQSLDGYCSDFLRDVSP
VTVNEQESDMAVNQTVFPLFQRRNNGNDSAPAASSSQYNGFQSHSLYGSDRARDPPSQQT
NPDRVTQTQEPLIPNNKPSLVNFSHFLRPAALAKTNNNSHGTKEKSPQSPPNVFQTRVLG
AKDTEDKVFNESVASATPMNNQKACLISEDSCRRDQESEKAVVCSSVGSGNSLDGPSESP
SLSLKRKHSDVQDNDCHSEDAEEESGDGRKGAAPSRTGLGSKRSRSAEVHNLSERRRRDR
INEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYMPPVMFPPGMGH
YPAAAAAMAMGMGMPYGMGLPDLSRGGGSSVNHGPQFQVSGMQQPVAMAIPRVSGGGFFA
GSSTMEMNKSENGSARDLPGSKDQTRTNNNNSSNLKPIKRKQASSDQFCGSSS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtttgagctttttaggctcacccaagctaagcttgaatctgctcaagacaac
aactcttctccacctatggatgaagttgtggagctggtgtgggaaaatggtcagatttca
actcaaagtcagtcaaacagatcgaggaacattcctccaccacaagctgttcatcaacca
aactctttgagagctagagatattggaaatgggtcaaaggcgaccatggtggacgagatc
cctatgtcagtaccatcactgatgaccggtttgagtcaagaagatgactttgttccatgg
ttgaatcataaccaatccttagatggatattgctctgattttttgcgtgatgtgtctcct
gttactgtcaacgagcaagagagcgatatggctgtaaatcaaactgttttccccttgttt
cagagaagaaacaatggcaacgactcagctcccgctgcttcttcatcacagtataacggt
ttccaatcgcattctctgtatggaagtgatagagctagagatcctcctagccaacaaacc
aatccggatcgggtgactcagacgcaagaaccactgatccctaataacaagcctagtttg
gtcaacttttcccatttcttacgccctgcagctttggctaagactaataataattctcat
ggcactaaagagaagagtcctcaaagccccccaaatgtgtttcagaccagagttcttgga
gcgaaagacactgaagataaggtttttaatgagtctgttgcttctgcgacgcctatgaat
aaccaaaaggcttgccttatttcagaggactcatgtagaagagaccaagagagtgaaaag
gccgttgtatgttcttctgttggttcgggtaatagtctcgatggcccgtccgaaagtcct
tcactttctttgaagagaaagcattcagatgttcaagacaatgactgtcatagtgaagat
gctgaagaagaatcaggagatggaagaaagggagcagcaccatctcgaacaggtttgggt
tcaaagaggagccgctcggctgaagtgcataatctctctgaaaggagacggcgtgatagg
attaacgagaagatgcgtgcccttcaagaactcattccaaactgcaacaaggtggacaaa
gcatcgatgctagatgaagcaattgagtatctcaagtcactccaacttcaagtacagatc
atgtcaatggcgtctggttattacatgccaccggttatgttcccaccgggtatggggcat
tacccagcagcagcagcagcgatggcaatgggtatgggaatgccctatggaatgggattg
cctgatttgagccgtggtggtggttcctcggttaaccacggaccacagttccaggtctcg
gggatgcaacaaccagtggcaatggcaattccacgtgtctctggtggtggtttctttgcc
ggttcttcaacgatggagatgaataagagcgagaatggttcggctagagacttaccgggt
tctaaagatcaaacaaggacgaataacaacaatagtagtaacttgaaaccaattaagaga
aaacaggcgtcttctgatcagttttgtgggtcgtcttcgtga
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