Camelina sativa (false flax): 104745035
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Entry
104745035 CDS
T05044
Name
(RefSeq) protein SIEL-like
KO
K13141
integrator complex subunit 4
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104745035
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
104745035
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GFIT
Motif
Pfam:
HEAT
MOR2-PAG1_C
Arm_2
Motif
Other DBs
NCBI-GeneID:
104745035
NCBI-ProteinID:
XP_019092542
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Position
15:3428402..3432531
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AA seq
631 aa
AA seq
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MEEDDSNSISAESISLDTLASIRSLIINADTSDSIISSVFDFLTGLLSRGDSPILHHILK
LLSDLAFRRKELAPQIFDSVLSNLLRLQNSAAAVESLAVLASLSERYPSIAATANSKIDG
EVFASICLGAPISSRLWLLRNAERFNVPSSVLFTLFLGFTKDPYPYIRKLALDGLISVCK
AGDLNHAHAVEGCYTRAVELLGDAEDSVRSSAVRAVSVWGKVMIASKEEEVDRRECTDAV
FLQLCSIVRDMSVDVRVEVFRGFGIVGTASESIILQTISKKVLGARKGKKPQNHLSNVSA
DVAAAAGIFIHGFEDEFYEVREAAVDSFHSLSVNSIKFPDEAVYLLMDMLYDDYMVVKLK
ALDALHHIADLGDLKIQETYMPAFLEAIVDTSENIRVEARNILKLAKLPDLKLVDKCVNG
VLKSLEMYPQDEPNTLSALFHFGQNHAKFLASLVKRFSEQLGTASGNKSEFNSRHLSASL
MLIISAPLSNKQSITSIPPLAFSYSLAMLGKFSRGLHEMMDQDTLLAYLTHCTILSASSG
TEFNKGDIFFHAYRHGDADFAGNPVLLPSKDISNESNQALKFVNYILLKIKAAWLLSQSG
CSKEALRALRFYSLQSIKIPASESLFQVYPI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgattcgaactcgatctctgctgaatcaatctctctcgacactctagct
tcaattagatcactcattatcaacgccgacacttccgactctataatttcctcggtgttc
gatttccttactggtcttctgagtcgaggagactcgccgattcttcaccacatcctcaag
ctactctccgatcttgccttccggcgaaaggaattagcgccacagatcttcgactcggtc
ctttccaacttactccgccttcaaaactccgccgccgccgtggaatcgcttgctgtgctg
gcgtcgttatccgagagataccctagcatcgccgccaccgcgaattccaaaatcgacggc
gaggtatttgcgtcgatttgtctcggagcacctatatcgtctcggctgtggctacttagg
aacgcggagaggttcaatgtcccgtcgtccgtacttttcaccttgtttttagggtttacc
aaggatccgtatccttatattcgaaaactagctctggatggactgattagtgtatgtaag
gctggtgatttgaatcacgctcatgccgtggaaggttgctatactcgtgctgttgagctt
ctaggcgatgctgaagatagcgtcagatcttctgcagttcgtgcagtcagtgtgtggggc
aaagtgatgattgcttccaaggaagaagaggtggacagaagagaatgtacagatgctgtg
tttctccagctttgttctatcgtgagagatatgagcgtagacgtgagggttgaggtcttc
aggggatttgggattgtaggaactgcatcagaaagcattatattgcaaacaatttctaaa
aaagtattgggagccaggaaagggaagaaaccgcagaatcatctttcgaatgtatcagct
gatgtcgctgctgcagctggaattttcatccatggttttgaagatgaattctacgaggta
cgggaagctgcggttgactccttccactccctctcagtaaattctatcaaattcccagat
gaagctgtttacctattgatggatatgttatacgatgattatatggttgtcaagttgaaa
gctttagatgcattgcatcatatagcagacttgggggacctgaagatacaggaaacttat
atgcccgcctttttggaagctattgttgatacttctgagaacataagagttgaggctaga
aacattcttaaactggcaaagctgcctgatttgaagctggtcgacaaatgtgttaatggt
gtccttaaaagtttagagatgtatccacaggacgaacctaataccttgtctgccctgttc
cattttggacaaaaccacgcgaagttcttagccagtctggttaagagatttagtgaacag
ttagggacagcttccggaaataaatctgaattcaacagccgacacttatctgcatctctt
atgctgataatctcagcccctctctcaaacaaacaaagcatcacctccataccacccctg
gctttttcatattcacttgcaatgctggggaaattctctcgtggacttcatgagatgatg
gaccaggatacgcttttggcttacttgactcattgcactattctttctgcttcttcgggt
acagaattcaacaaaggagatatattttttcatgcatataggcacggtgatgcagatttt
gctggaaaccctgtcttactaccaagcaaagatatatctaatgagagtaatcaagcactc
aagtttgttaactatatactgttgaaaataaaggctgcctggttgttatcacaatcaggg
tgctcgaaagaagcactccgagcgttgaggttttacagcttacaatctattaaaattcca
gcctctgaatcattgtttcaggtgtaccctatctaa
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