Camelina sativa (false flax): 104755147
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Entry
104755147 CDS
T05044
Name
(RefSeq) transcription factor PIF3
KO
K12126
phytochrome-interacting factor 3
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
csat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104755147
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104755147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104755147
Transcription factors [BR:
csat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104755147
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104755147
NCBI-ProteinID:
XP_010475789
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Position
17:3894844..3898090
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AA seq
534 aa
AA seq
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MPLFELFRLTQAKLESAQDNNPSPPVDEVVELVWENGQISTQSQSNRSRNIPPPQAVHQP
NSSRARDIGNGSKATMVDEIPMSVPSLMTGLSQEDDFVPWLNHNQSLDGYCSDFLRDVSP
VTVNEQESDMAVNQTVFPLFQRRNNGNESAPAASSSQYNGFQSHSLYGSDRARDPPSQQT
NPDRVTQTQEPLIPSNRPSLVNFSHFLRPAALVKTNNNPQGTKEKSPQSPPNVFQTRVLG
AKDTEDKVFNESVASATPMNNQKACLISEDSCRRDQESEKAVVCSSVGSGNSLDGPSESP
SLSLKRKHSDVQDNDCHSEDAEEESGDGRKGAAPSRTGLGSKRSRSAEVHNLSERRRRDR
INEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYMPPVMFPPGMGH
YPAAAAAMAMGMGMPYAMGLPDLSRGGGSSVNHGPQFQVSGMQQPVAMAIPRVSGGGFFA
GSSTMEMNKSENGSTRDLQGSKDQTRTNNNNSSNLKPIKRKQASSSDQFCGSSS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtttgagctttttaggctcactcaagctaagcttgaatctgctcaagacaac
aacccttctccacctgtggatgaagttgtggagctggtgtgggaaaatggtcagatttca
actcaaagtcagtcaaacagatcgaggaacattcctccaccacaagctgttcatcaacca
aactcttcgagagctagagatattggaaatggttcgaaggcgaccatggtggacgagatc
cctatgtcagtaccatcactgatgacgggtttgagtcaagaagatgactttgttccatgg
ttgaatcataaccaatccctagatggatattgctctgatttcttgcgtgatgtgtctcct
gttactgtcaacgagcaagagagcgacatggctgtaaaccaaactgtcttccccttgttt
cagagaagaaacaatggcaacgaatcagctcctgctgcttcttcatcacagtataacggt
ttccaatcgcattctctgtatggaagtgatagagctagagatcctcctagccaacaaacc
aatccagatcgggtgactcagacgcaagagccactcatacctagtaacaggcctagtttg
gtcaacttttcccatttcttacgccctgcagctttggtcaagactaataataaccctcag
ggaactaaagagaagagtcctcaaagcccccctaatgtgtttcagaccagagttcttgga
gctaaagacactgaagataaggtttttaatgagtctgttgcttctgcgactcctatgaat
aaccaaaaggcttgccttatttcagaggactcatgtagaagagaccaagagagtgaaaag
gccgttgtatgttcttctgttggttcgggtaatagtctcgatggcccgtccgaaagccct
tcactttctttaaagagaaagcattcagatgttcaagacaatgactgtcatagtgaagat
gctgaagaagaatcaggtgatggaagaaagggagcagcaccatctagaacaggtttgggt
tcaaagaggagccgctcggctgaagtgcataatctgtctgaaaggagacggcgtgatagg
attaacgagaagatgcgtgcccttcaagaactcattccaaactgcaacaaggtggacaaa
gcatcgatgctagatgaagcaattgagtatctcaagtcactacaacttcaagtacagatc
atgtcaatggcgtctggttattacatgccaccggttatgttcccaccgggtatggggcat
tacccagcagcagcagcagcaatggcaatgggtatgggaatgccttatgcaatgggattg
cctgatttgagccgtggtggtggttcctcagttaaccacggaccacagttccaggtctcg
gggatgcaacagccagtggcaatggcaataccacgagtctccggtggtggtttctttgcg
ggttcttcaacgatggagatgaataagagcgagaacggttcgactagagatttacagggt
tctaaagatcaaacaaggacgaataacaacaatagtagtaacttgaaaccaattaagaga
aaacaggcgtcttcttctgatcagttttgtgggtcgtcgtcgtga
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