Camelina sativa (false flax): 104759988
Help
Entry
104759988 CDS
T05044
Name
(RefSeq) ATP-dependent helicase rhp16
KO
K15083
DNA repair protein RAD16
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104759988
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
104759988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-RING_5
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
zf-RING_UBOX
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
104759988
NCBI-ProteinID:
XP_010481151
LinkDB
All DBs
Position
3:767886..772281
Genome browser
AA seq
695 aa
AA seq
DB search
MELRSHKNAILPVTSSGDGEVNANDYILRSNANTKGKWQILREDAQGWIDRHMAAEGLAF
DQQNAVTADPPPDLIMPLLRYQKEFLAWASKHELSHVRGGILADEMGMGKTIQAISLVLG
RRLADRALFRKPVGCTLVLCPPVALSQWLDEISRLTSPGSTKVLVYHGAKRANIVKEFMN
CDFVLTTYSTLEFESRAIRKNAGVDTRESPLHSIKWNRIILDEAHGIKNALSHTAKTVFA
LEATYRWALSGTPLQNHIGELYSLIRFLRVYPYSYIFCKKCDCQVLDLSARESCLRCRHY
AVQHVCWWRKIVAEPIRIYGSLERGKRANILLKHKVLNEIFLRRTKLGRAADLALPLRII
SLRRDALDTAEADYYESLYKDSQAKFNTYVQAGTLMNNYANIFGLLTRLRQAVNHPHLVV
HSSSSGANTNLLDENKNEQECGVCHDPAKDYFVTSCAHVLCDSCLVGSPTSLGKVICPTC
SKLVSVDWKPKADTEHQTSKTKLKGFRASSILNRINLNCFQTSTKIEALREEIRFMVERD
GSAKAIVFSQFTSFLDLISYALGKSGVSYVKVVGGMSRAARDAAVNKFKEDKNCRIFLTG
LKTGGVALNLTAASHVFMMDPWWNPAAERQAQDRIHRIGQYKPIRVVRFIMEKTVEERIL
TLQKKKEELFESTVGDSDEGAVPKLSEDDIRSLFA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggagctacgctcccacaagaatgcgattcttccggttactagtagcggagatggtgag
gtcaatgctaatgactatatactacgatcaaatgcaaacactaaaggaaagtggcagatc
ttgagagaagatgctcagggatggattgatagacatatggcggcggagggtcttgctttt
gatcagcagaacgctgtcactgctgacccgcctccagatttgattatgccgctattaaga
taccaaaaggaatttttggcctgggcatcaaaacatgaactatcacatgtaagaggaggt
attctcgctgatgagatgggaatgggcaaaaccatacaagccatctctctcgttcttggc
agacgactagctgacagagccctattccggaaaccagttggctgcacccttgtgctttgt
cctcctgttgctctttctcagtggttagatgagatttctcggttgacatccccgggatcc
accaaggttcttgtataccatggggccaagagagccaacattgttaaagaattcatgaac
tgcgactttgttttgacaacgtattccacacttgagtttgaatctagggcgataaggaag
aatgcaggagtcgacacaagagagtctcctttacactctattaagtggaatcgtatcatt
ttggatgaggctcatggtatcaaaaacgcccttagtcacactgcaaaaactgtttttgct
ttggaggctacctacagatgggctctgagtggtacccctctccagaatcatattggagag
ctttactcgctgattcgcttccttcgagtttacccatactcatatattttttgcaagaaa
tgtgactgtcaagttcttgatctcagtgcgcgtgaaagctgtctcagatgtcgtcattat
gcagttcaacatgtctgttggtggagaaagattgtggccgaaccaataagaatatatgga
agcttagaacggggaaagagagccaatatattgcttaaacacaaagttcttaatgaaatc
ttcctaagacgtactaaattaggccgggcagctgaccttgctcttcctcttagaatcatc
tctctgaggcgggatgcactagatacagcagaagccgattactatgaatcactatacaaa
gacagccaggcaaagtttaatacgtatgttcaggctgggacattgatgaataactatgca
aatatatttggtcttcttacacgtctgagacaagctgttaatcatccacaccttgtggtg
cattctagttctagtggcgctaacaccaacttgcttgatgagaacaaaaatgaacaagaa
tgcggtgtctgccatgacccagccaaggactactttgtgacttcctgtgcacatgtgttg
tgtgattcttgtttggttggttcacctacatccctgggaaaagtcatctgcccaacatgc
tcaaaactagtgagtgtggattggaaacccaaagctgacacagaacatcagacaagcaag
acaaagcttaaaggatttagagcctctagcattttaaatcggataaacctcaactgtttt
cagacaagtacaaagattgaggctttgagagaagaaatcaggttcatggttgaaagagat
gggtctgccaaagcaatagttttcagccagttcacatcattcttggacctgattagttac
gctctggggaagtctggggttagctatgttaaagtggtgggaggcatgtccagggcagct
agagatgctgcagtcaataaatttaaagaagacaaaaactgcagaattttcttaactgga
ttgaaaactggaggggttgctctaaatctaacagccgcttcgcatgtgttcatgatggac
ccgtggtggaacccagcggctgagaggcaagcacaggacagaatacataggatcggacag
tacaagcctatcagggtagtaagattcataatggagaaaacagtagaggaaaggatactg
acgcttcaaaagaagaaagaagaactgtttgaaagtacggtaggtgactcggatgaaggc
gctgtaccaaaactgagtgaagacgatatcaggtcattgttcgcataa
DBGET
integrated database retrieval system