KEGG   Camelina sativa (false flax): 104760535
Entry
104760535         CDS       T05044                                 
Name
(RefSeq) ABC transporter I family member 21
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104760535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104760535
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     104760535
SSDB
Motif
Pfam: ABC_tran AAA_21 nSTAND3 AAA_29 ORC-CDC6-like AAA_15 SMC_N AAA_23 AAA_28 NACHT AAA_25 AAA AAA_18 SRP54 PduV-EutP AAA_30 Zeta_toxin AAA_22 AAA_5 AAA_33 AAA_24 Arf AAA_16 AAA_14
Other DBs
NCBI-GeneID: 104760535
NCBI-ProteinID: XP_010481776
LinkDB
Position
18:4699285..4701261
AA seq 281 aa
MAVNGENGVGAIRVSGMQFSYDVQDPIFFDFNIDLSAGSRCLLVGANGSGKTTLLKILAG
KHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAGDIPLQGDFSAEHMIFG
VEGIDPVRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVV
ARMDLLEFFKEECEQRGATIVYATHIFDGLETWASHLAYIHGGELKLSAKLDDIKDLKTS
PNLLSVVESWLRSETKVEKKTKKKPVVTSPFMSSRQMAYYR
NT seq 846 nt   +upstreamnt  +downstreamnt
atggcggtgaacggtgaaaatggtgtcggtgcgattagggttagcggaatgcagttttct
tacgatgtccaggatcctattttcttcgatttcaacatcgatctctccgctggatctcgt
tgtctcttggttggtgctaatggatctgggaaaacaacattattgaagattctggctgga
aagcatatggttggaggaaagaacgttgtacaagtgcttgatcgttcggcatttcatgat
acagagcttgtttgtagtggtgatttgtcttaccttggaggatcatggagtaaaactgct
ggttctgctggtgacattcctcttcagggagatttctcagcagaacatatgatatttgga
gttgaagggattgatcctgtgagaagagagaagttgattgatcttcttgatatcaatctt
caatggcgtatgcataaggtttctgatggccagagacgtcgtgtgcaaatatgtatgggt
cttttacatcctttcaaggtgttattactggatgaggttactgtcgacctcgacgttgtt
gctaggatggatttattggaattctttaaagaagaatgtgaacagagaggagctacaatt
gtatacgcaactcatattttcgacggtctagagacatgggctagtcatctggcttacatt
catggaggagagctgaaactctcggccaaattggatgacatcaaggatctcaaaacctca
ccaaatctgctctctgttgttgaatcttggctccggtctgaaaccaaagtcgagaagaag
acgaagaagaaacctgttgttacgtctccatttatgtcctctagacaaatggcgtattac
cgatga

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