Camelina sativa (false flax): 104760535
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Entry
104760535 CDS
T05044
Name
(RefSeq) ABC transporter I family member 21
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104760535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104760535
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104760535
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
ORC-CDC6-like
AAA_15
SMC_N
AAA_23
AAA_28
NACHT
AAA_25
AAA
AAA_18
SRP54
PduV-EutP
AAA_30
Zeta_toxin
AAA_22
AAA_5
AAA_33
AAA_24
Arf
AAA_16
AAA_14
Motif
Other DBs
NCBI-GeneID:
104760535
NCBI-ProteinID:
XP_010481776
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Position
18:4699285..4701261
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AA seq
281 aa
AA seq
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MAVNGENGVGAIRVSGMQFSYDVQDPIFFDFNIDLSAGSRCLLVGANGSGKTTLLKILAG
KHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAGDIPLQGDFSAEHMIFG
VEGIDPVRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVV
ARMDLLEFFKEECEQRGATIVYATHIFDGLETWASHLAYIHGGELKLSAKLDDIKDLKTS
PNLLSVVESWLRSETKVEKKTKKKPVVTSPFMSSRQMAYYR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaacggtgaaaatggtgtcggtgcgattagggttagcggaatgcagttttct
tacgatgtccaggatcctattttcttcgatttcaacatcgatctctccgctggatctcgt
tgtctcttggttggtgctaatggatctgggaaaacaacattattgaagattctggctgga
aagcatatggttggaggaaagaacgttgtacaagtgcttgatcgttcggcatttcatgat
acagagcttgtttgtagtggtgatttgtcttaccttggaggatcatggagtaaaactgct
ggttctgctggtgacattcctcttcagggagatttctcagcagaacatatgatatttgga
gttgaagggattgatcctgtgagaagagagaagttgattgatcttcttgatatcaatctt
caatggcgtatgcataaggtttctgatggccagagacgtcgtgtgcaaatatgtatgggt
cttttacatcctttcaaggtgttattactggatgaggttactgtcgacctcgacgttgtt
gctaggatggatttattggaattctttaaagaagaatgtgaacagagaggagctacaatt
gtatacgcaactcatattttcgacggtctagagacatgggctagtcatctggcttacatt
catggaggagagctgaaactctcggccaaattggatgacatcaaggatctcaaaacctca
ccaaatctgctctctgttgttgaatcttggctccggtctgaaaccaaagtcgagaagaag
acgaagaagaaacctgttgttacgtctccatttatgtcctctagacaaatggcgtattac
cgatga
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