Camelina sativa (false flax): 104766821
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Entry
104766821 CDS
T05044
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104766821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104766821
Transcription factors [BR:
csat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104766821
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104766821
NCBI-ProteinID:
XP_010489088
UniProt:
A0ABM0XPT3
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All DBs
Position
19:20902395..20905537
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AA seq
629 aa
AA seq
DB search
MHHFVPDFDTDDDYVNSSSLNLPRKSITTTTTMGGDDDNDHLMELLWHNGQVVVHNQRLH
HHNNNKKPSSSPPKMLLQPPPSPMQQQPSDQNLFIHEDEMTSWLHYPLRDDTDDFCSDLL
FSSAAPGAPCVAATTAERQMTSLAVTTPRPPVVERQMTSQAVTAPRPPVVERQMTSQAVT
APRPPVVERQMTSQAVTAPRPPVVERQMTSQAVTAPRPPVVERQMTSQAVTAPRPPVVER
QMTSQAVTAPRPPVVERQMTSQAVTAPRSPVVERQMTSQAVTAPNPSLPRPPVRNFMNFS
RLRGDFTNGRGESGQPSVSKAVVRESTQVNTSAAAAIPSAAVASEFGLTRRMDGAEKCSA
VAGGGLDRKGKAVATTTIEIPGISTPIMSKSEIGPEKTIVDERKRQEREAIGETECRNEN
EETKQGRGSTKRSRAAEVHNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYM
KSLQLQIQMMSMGCGMMPMMYPGMQQYMAMGMGMNQPLPPPSFMPFPNMLPAQRPLPTQT
PIGGGSVFPAPQYPVHPSDPSRLYVQNQQCDPTLSQPPQYPGFMDPYQQFRGVHPSQPPP
FQNQATSYPSSSRVSSTKESVDQGNHTKG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatttcgtcccagacttcgatacagatgacgattatgtcaattcctcatctttg
aatcttcctagaaaatccattactactactactactatgggtggtgatgatgataatgat
catcttatggagcttttatggcacaacggtcaagttgttgttcataaccagagacttcat
caccataacaataacaagaaaccttcttcttctccacccaagatgcttcttcaacctcct
ccttctcctatgcagcagcaaccgtcagatcagaatctttttatccatgaagacgaaatg
acctcatggcttcattatcctctccgtgacgataccgacgacttctgctcagatcttctc
ttctcttcagccgcgcccggtgctccgtgtgtggcggcgacgacggcggagagacagatg
actagtctagcggttacgacaccgagaccgccggtggtggagagacagatgacgagtcaa
gcggttacggcaccgagaccgccggtggtggagagacagatgacgagtcaagcggttacg
gcaccgagaccgccggtggtggagagacagatgacgagtcaagcggttacggcaccgaga
ccgccggtggtggagagacagatgacgagtcaagcggttacggcaccgagaccgccggtg
gtggagagacagatgacgagtcaagcggttacggcaccgagaccgccggtggtggagaga
cagatgacgagtcaagcggttacggcaccgagaccgccggtggtggagagacagatgacg
agtcaagcggttacggcaccaagatcgccggtggtggagagacagatgacgagtcaagcg
gttacggcgccgaacccgtcgttgccgaggccgccggtgaggaattttatgaatttttcg
aggctgagaggcgattttaccaacggtagaggtgaatctggacaaccgtcggtttccaag
gcggttgtgagggaatcgacgcaggtgaatactagcgctgccgccgcgataccgtcggcg
gcggtggcgagtgaatttggtttaacgcggcggatggatggtgctgaaaaatgctccgcc
gtagctggaggcggacttgatcggaagggaaaagcagtggcgacgacgacgattgagatt
cctggtatatctactcctataatgtcgaagagcgaaatcggaccggagaagacgatcgtc
gatgagaggaaacgacaagagagagaagccattggcgagactgagtgtcgcaacgagaac
gaggaaactaaacaaggacgtggatcaaccaagagatctcgtgctgctgaagttcacaat
ctctctgaaaggaaacgaagagataggatcaacgagaggatgaaagctctgcaagaactc
attcctcgctgcaacaagtcagacaaagcttccatgctggatgaagctattgagtacatg
aaatctctacagcttcagatacagatgatgtcaatgggatgtggtatgatgccaatgatg
tatccgggtatgcaacaatacatggccatggggatgggtatgaaccagcctcttcctcct
ccttccttcatgccttttcccaatatgttgcctgctcaaagacctttgcctacacagacc
cctataggaggaggctctgtattcccagcaccgcagtaccctgttcatccttctgaccca
tcaagactatatgttcagaaccagcaatgtgatccaacattgagccagcctcctcagtat
cctggtttcatggatccatatcagcagttccgcggtgtccacccgagtcaaccacctccg
tttcagaatcaagcaacatcgtacccaagttcaagcagggtaagcagtaccaaggaatct
gtggatcagggaaaccacacaaaaggttaa
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