Camelina sativa (false flax): 104767826
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Entry
104767826 CDS
T05044
Name
(RefSeq) transcription factor PIF3-like
KO
K12126
phytochrome-interacting factor 3
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
csat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104767826
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104767826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104767826
Transcription factors [BR:
csat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104767826
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104767826
NCBI-ProteinID:
XP_010490103
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Position
3:3992765..3995862
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AA seq
533 aa
AA seq
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MPLFELFRLTQAKLESAQDNNPSPPVDEVVELVWENGQISTQSQSNRSRNIPPPQAVHQP
NSLRARDIGNGSKTTMVDEIPMSVPSLMTGLSQEDDFVPWLNHNQSLDGYCSDFLRDVSP
VTVNEQESDMAVNQTVFPLFQRRNNGNESAPAASSSQYNGFQSHSLYGSDRARDPPSQQT
NPDRVTQTQEPLIPNNKPSLVNFSHFLRPAALAKTNNNPQGTKEKSPQSPPNVFQTRVLG
AKDTEDKVFNESVASATPMNNQKACLISEDSCRRDQESEKAVVCSSVGSGNSLDGPSESP
SLSLKRKHSDVQDNDCHSEDAEEESGDGRKGAAPSRTGLGSKRSRSAEVHNLSERRRRDR
INEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIMSMASGYYMPPVMFPPGMGH
YPGAAAAMAMGMGMPYAMGLPDLSRGGGSSVNQGPQFQVSGMQQPVAMAIPRVSGSGFFA
GSSTMEMNKSENGSARDLPGSKDQTRTNNNNSSNLKPIKRKQASSDQFCGSSS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgtttgagctttttaggctcacccaagctaagcttgaatctgctcaggacaac
aacccttctccacctgtggatgaagttgtggagctggtgtgggaaaatggtcagatttca
actcaaagtcagtcaaacagatcgaggaacattcctccaccacaagctgttcatcaacca
aactctttgagagctagagatattggaaatggctcaaagaccaccatggtggacgagatc
cctatgtcagtaccatcactgatgacgggtttgagtcaagaagatgactttgttccatgg
ttgaatcataaccaatccctagatggatattgctctgatttcttgcgtgatgtgtctcct
gttactgtcaacgagcaagagagcgatatggctgttaatcaaactgttttccccttgttt
cagagaagaaacaatggcaacgaatcagctcccgctgcttcttcatcacagtataacggt
ttccaatcgcattctctgtatggaagtgatagagctagagatcctcctagccaacaaacc
aatccggatcgggtgactcagacgcaagaaccactgatccctaataacaagcctagtttg
gtcaacttttcccatttcttacgccctgcagctttggccaagactaataataaccctcag
ggaactaaagagaagagtcctcaaagcccgccgaatgtttttcagaccagagttcttgga
gctaaagacactgaagataaggtttttaatgagtctgttgcttctgcgacgcctatgaat
aaccaaaaggcttgccttatttcagaggactcatgtagaagagaccaagagagtgaaaag
gccgttgtatgttcttctgttggttcgggtaatagtctcgatggcccgtccgaaagtcct
tcactttctttaaagagaaagcattcagatgttcaagacaatgactgtcatagtgaagat
gctgaagaagaatcaggagatggaagaaagggagcagcaccatctcgaacaggtttgggt
tcaaagaggagccgctcggctgaagtgcataatctctctgaaaggagacggcgtgatagg
attaacgagaagatgcgtgcccttcaggaactcattccaaactgcaacaaggtggacaaa
gcatcgatgctagatgaagcaattgagtatctcaagtcactacaacttcaagtacagatt
atgtcaatggcgtctggctattacatgccaccggttatgttcccaccgggtatggggcat
tacccaggagcagcagcagcaatggcaatgggtatgggaatgccgtatgcaatgggattg
cctgatttgagccgtggtggtggttcctcggttaaccagggaccacagttccaggtctcg
gggatgcaacaaccagtggcaatggcaattccacgtgtctctggtagtggtttctttgcg
ggttcttcaacgatggagatgaataagagcgagaatggttcggctagagacttaccgggt
tctaaagatcaaacaaggacgaataacaacaatagtagtaacttgaaaccaattaagaga
aaacaggcgtcttctgatcagttttgtgggtcgtcttcgtga
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