Camelina sativa (false flax): 104768392
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Entry
104768392 CDS
T05044
Name
(RefSeq) ABC transporter I family member 20-like isoform X1
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104768392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104768392
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104768392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
AAA_23
Arf
AAA
ORC-CDC6-like
nSTAND3
AAA_30
AAA_28
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
104768392
NCBI-ProteinID:
XP_010490645
LinkDB
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Position
20:complement(628370..630404)
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AA seq
337 aa
AA seq
DB search
MAVTEEEKRNATVEISGLRFTYPGIDGHPPPGSKPLIEDFSITLNSSDRCLLVGSNGAGK
TTILKILGGKHMVEPHMVRVLGRSAFHDTGLTSSGDLCYLGGERTLFSSLFFQWRRDVAF
AGFEVPIQMDISAEKMIFGVAGIDPKRRDELIKVLDIDISWRLHKVSDGQRRRVQICMGL
LKPFKVLLLDEITVDLDVLARADLLQFLRKECDERGATIIYATHIFDGLEDWPTHIVYVA
NGKLQLALPMEKVKETSKKSLMRTVEAWLRKERDEERKRRKERKANGLPEFESRAEESRV
TGDPARMLNNGWAAGRLHSTVKGGEDNFVLSSNRVLR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacggaagaagagaagcgaaacgcaacggttgagatctccgggttacgtttc
acgtatcctggaatcgacggtcatccacctccgggatcgaaaccacttatagaagatttc
tcaatcacgctcaattcaagcgatcgttgtctcctcgtcggatctaatggcgccgggaaa
acaacgattctgaagatattgggaggaaaacatatggtggagcctcacatggttagggtt
ctgggtcgctccgcgtttcacgataccggattgacatcttctggtgatctctgctatctc
ggtggagagagaacattgttttcctctctttttttccagtggaggcgtgatgttgcattt
gcaggatttgaagttccgattcaaatggatatttcagcggagaaaatgatatttggagtg
gctggtattgatcctaagagaagagatgagttgatcaaggtgttggatattgatatctca
tggagattgcacaaggtatcagatggccaaagaagacgtgtccagatttgtatgggactc
ctcaagccattcaaggttctcctattagatgaaataactgttgaccttgacgtactcgca
agagccgaccttttgcaatttctaagaaaggaatgtgatgaacgaggagcaaccataatc
tacgcgactcatatatttgatggcctagaggattggccaacacacattgtgtatgtcgct
aacgggaaattgcagctagcattgccaatggagaaagtgaaggagacgagcaagaagtca
ctgatgagaacagttgaggcttggctcaggaaagaaagagatgaagagaggaagagaaga
aaagagaggaaagcaaatgggcttccggaatttgaatcacgggctgaagaaagccgtgtg
accggtgatccagcacgaatgcttaacaatggctgggctgctgggagacttcactctacg
gttaaaggcggtgaggataatttcgtcttaagctcaaacagagttctaagataa
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