Camelina sativa (false flax): 104770817
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Entry
104770817 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104770817 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104770817
03400 DNA repair and recombination proteins [BR:
csat03400
]
104770817
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104770817
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104770817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104770817
NCBI-ProteinID:
XP_019098023
UniProt:
A0ABM1RG85
LinkDB
All DBs
Position
20:complement(14583544..14594970)
Genome browser
AA seq
1577 aa
AA seq
DB search
MSSRRTVKRSLILSDDEDEDIFYSFKVLLPNGTSVKLTLSNPDPKMSMQNFVNLVKMEYE
NARKDCVLLSKRTRVDWNSGGKFSLESNGEKMNGIVRFAAFKPNICHIIRLDDGSGIAST
MYENLWDLTPDTDLLKELPENYSFETALADLIDNSLQAVWPYREGARKLISVDISADRIT
VFDTGKGMDSSEENSIDKWGKIGASLHRSQKTDAIGGDPPYLKPYFGMFGYGGPYASMFL
GRRTLVSSKTKESKKVFTFQFKKEALIDNRSILGKNWKTDGGMRDPSEEEIKLSPHGSFT
KVEIFESEFDISKIYQLQCRLKDIYFPYIQCDELSKTGRTERPVEFQVNGEDLAEITGGE
VAITNLHSTGQVYSFEIRFTLSGGKRKGTTQKANARLKFVYFPIVQGKESFEKILESLEE
EGCKVSESFQTFGRVSVRRLGRLLPEVRWDSIPFMVRGNRASTLQKGSRRVKCFVDLDAG
FSPTPSKTDLASQNPFSVALRNFGNKPTEKEKDDDVSFEIFKEGKNVSYAQVDDNFRDWV
LKMHDTHDEEAASGEDEAVLIVGSLDKKALVISRDAVRVHKVVTRKGMSWKRGQNIKILR
GACAGVHNNNVYATIDYFLIEGFEDEAGGDTRILCRLIDRPESEGCKLSIIDGISKLEIG
RSLSLPVTIIDSGKCLPVDANEWNRKLEKQQEKAPSKIDLLDERDCRELGIDGELPVGDS
VRAGRAPPKQIVAVVRPACFTSSTPSKKLDQLKLEQKHIVKMDEEMVMVVKLLDTNMKPS
DKNVKPVYSQRLCPTSRKGISGLYIFSLGSKLPNLFKKAGTYKFSFSIGNSIKCNKTVVV
RPSSKVARWELDDNLESLPCNVQVGSSLPPFRITCFDEYKNRIPFTTVPSLEVELEANPR
FLLKIDQIEADLIDSGSILKIENMLVETGELDQIRPTYEATLEIRAMDKPFSVSVACKVN
PGPPERVAVNNPKALDNLLPGSTVEDFILEMFDGYNNHVAEGTDVLIHIDGYRIEDWMGV
NRKVDGRGCIDLSGLLKVTEGYGKSVSLSVIYGNEVIFRKESQIEERELRLVKELPECCA
AGSNLVNLIFQVTDSEGSLDASIHHDEKSGWFHTMSIESDSSSVESEIRYAFVHGSCRVP
SLSLPENEGVFAFRVFHSRYPELHLSLKTQVTSASSYEREGTGYSTPYPRTTTPPESGIP
LITNPGLTPCSQIGVLAIRSSSLALSSQTSLMDMAQYAESLKEKINTYEEYRFEVDKHLE
SLQAEHEHAEQELSALQASLEPLGASFPECLSTKESMMKQIEEKHHDTAASVFCCLYREA
PPPQSFFLSNKGMFGVVALLGSVASTSLSRVLSEYLGKDTMLSLVCKSSQFGQKSDEYRK
LQSEAASHGRTITNRFLVICLDATRPWRNGVVKNDPQKRLAMDSPYLPNGDPIPGFKGYG
VNMIHLNSEELDIQSNSGHGLRETLFYGIFGELQVYETAEDLEAALPHINGDAVSLDGVI
ARENGFIYSGCCTPEVHFPITVTEKQEKALVRMEIARGKKRKAEKEIAEENSKKRRLVKK
LKKATEKYECLTATADS
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcaggcgaacagtgaagagatcattgattttatctgacgatgaagatgaagat
atcttttacagcttcaaggttcttctacctaacggtactagtgtgaaactcacacttagt
aacccagatccaaagatgtctatgcaaaactttgtcaacctcgtgaagatggagtacgaa
aatgctaggaaagactgtgttttgctgtctaagaggacgagggttgattggaactcaggc
ggaaagttttctcttgagtcaaatggcgagaagatgaatggcattgttcgttttgctgcc
tttaagccgaacatttgtcatataatacgccttgatgacggttctggtatagcttccacc
atgtatgagaacttgtgggacctgacacctgatactgatctgcttaaagaactacctgaa
aattatagctttgagacagctctcgcggatctgatagacaattccttgcaagctgtgtgg
ccttatcgtgaaggagctcggaaactgattagtgtggatatttctgctgaccggattaca
gtctttgataccgggaaaggaatggacagtagtgaggaaaattctattgacaaatggggt
aagattggggcgtcattacatagatctcaaaaaaccgatgctattggaggcgacccacca
taccttaagccatactttgggatgttcggatatggaggtccttatgcttctatgttcttg
ggaaggcgtactttggtgtcttctaagacaaaagagtccaagaaagtattcacttttcag
tttaagaaagaagccttgattgacaatcggtctattttgggaaaaaactggaagactgat
ggtggcatgagggacccatcggaggaggaaattaagttatcgcctcatggaagctttaca
aaggttgagatatttgaatcagaatttgacatctccaaaatatatcaactccagtgcagg
cttaaggatatctactttccttacatccagtgtgatgaactctccaaaactgggagaact
gaaaggcctgtagagtttcaggtcaatggggaagatttagctgagataacaggtggagag
gttgccattaccaacctacactccacgggtcaagtatattcatttgagattcgattcact
ctctccggtgggaaaagaaaagggacaacccaaaaggcaaacgctcgcctgaagtttgtt
tattttccaatcgtccagggaaaagaaagctttgagaaaattttggagagtttagaagag
gaaggatgcaaagtttctgaaagcttccaaacttttggtcgtgtttcagtaagaaggctt
ggtcgtctacttccagaagtccgttgggattcaataccgtttatggtgagaggaaataga
gcgtctactttgcagaaaggctcccgaagagtaaaatgctttgttgatttggatgctggt
tttagccctacgccgtccaaaaccgaccttgcgagccaaaatcctttctcagtagctcta
agaaactttggtaataaaccgacggagaaagagaaggatgatgatgtcagctttgagatt
tttaaagaaggaaagaatgtcagctacgcgcaagttgacgataattttagagattgggtt
ctgaagatgcatgatacccatgatgaagaagctgcatcgggtgaagatgaagctgtcctc
attgttggatcactggataaaaaggcccttgtcatttcgcgtgatgctgtgagggtgcac
aaggtagttacgagaaaaggaatgtcatggaaacgtggtcagaatataaagattctgaga
ggagcttgtgctggggttcacaataacaatgtgtatgccaccattgactattttctaata
gaagggtttgaggacgaagcaggcggggatactcggattttatgcaggcttatcgatcgc
cctgagagtgagggatgcaagctgtcaatcatcgatggaatttcgaaactggaaattggg
aggtctttatctttaccagtcactataatcgactctggaaagtgcctacctgtagatgca
aacgaatggaatagaaaacttgagaagcaacaggaaaaggcaccgtcaaaaattgatttg
ctggatgagagagattgcagagaattgggcattgatggggaattaccagttggtgattcc
gtgcgtgctgggcgagctcccccaaaacagattgtagcagttgtccgacctgcatgcttc
acgtcttcaacaccgtccaagaagttggaccagttgaagttggaacagaaacatattgtt
aagatggatgaagaaatggtcatggtagtaaaattgctagacacaaatatgaaaccgagt
gataagaatgtcaaacctgtgtattcgcagcgcttgtgtcctacatctcgtaaagggatt
agtggtctctacattttttcacttgggtccaagttaccgaaccttttcaagaaagctggc
acttacaaattttctttctccattggaaattcgattaagtgcaacaaaacggtggttgtt
aggccttcttcaaaggtagcaaggtgggaacttgacgataatctggaatcccttccatgc
aatgttcaggtgggttcttctcttccaccattccgtatcacttgctttgatgagtacaaa
aaccggatcccgttcactactgttccaagcctggaagttgaactggaagctaaccctaga
ttcctactcaagattgatcaaattgaggccgacctgatagatagtggatcaattcttaaa
attgagaatatgctcgttgagactggtgagttagaccagatcaggccaacttacgaagca
accttagagatacgcgcaatggacaagcctttttctgtctcggttgcttgtaaagttaat
cccgggcctccggaacgagttgctgtgaataatcccaaggctttggataatttgcttccc
ggttctactgttgaagattttatccttgagatgttcgatggatataataaccatgttgca
gaggggaccgatgttctgatacatattgatgggtaccgtatcgaagactggatgggcgtc
aaccgtaaggttgatggtcgtggctgcattgatctctctggccttcttaaagtcacagaa
ggctatgggaaatctgtatcactgtccgtaatatatggtaatgaagttatcttcaggaaa
gagtctcaaattgaggaacgagagctaagacttgtaaaagagctgcccgaatgctgtgct
gctggttcaaatctcgtgaacctcatcttccaagtgacggattcagagggttctttggat
gctagcatccatcatgacgaaaaatctgggtggttccatacaatgagcattgaatctgat
tcaagtagcgttgagagcgaaatcagatatgcctttgtccatggatcctgcagagttcct
tctctttccctcccagagaacgagggtgtctttgctttcagggtgttccattcgcgatac
cctgagctgcatttgagcttaaagactcaggtaacatctgcttcctcatatgaaagagaa
gggactgggtattcaacaccttatccaaggacgactacaccacctgaatcaggaatccct
ttaatcacaaatccagggctgactccatgttcacagattggagtgttggccattaggtca
tcttcattggctctcagtagccaaactagcctgatggatatggcacagtacgctgagagc
ttaaaagaaaaaatcaatacatacgaagaataccgatttgaagtagataagcacctagaa
agtttgcaggctgaacatgaacatgctgagcaagagttgagtgcgctgcaagcttctctg
gaacctcttggtgcatcgttcccagaatgcctatccacaaaagaatctatgatgaaacaa
atcgaagagaagcatcatgacactgcagcatcggttttctgctgtctgtacagagaggct
ccacctccacagtctttttttctgtcaaacaaaggaatgtttggcgttgtagcgcttctc
ggttcagttgcctccacctcccttagcagggttttgtctgaatatttggggaaagacaca
atgctttcattggtgtgcaaatcatcacaatttggacagaaaagcgatgagtatcgcaag
cttcaatctgaagcagctagccacggacgaactatcaccaatcggtttcttgttatttgt
cttgatgcaaccagaccttggaggaatggagttgtgaagaatgatcctcagaagagatta
gccatggatagcccttacctgccgaatggagatcctattcccggtttcaaaggctacggt
gtgaacatgatacacttaaattcagaggagctggatatacaatcaaactcgggtcatggg
cttagagagacgctattctatgggatttttggagagttgcaggtatatgagaccgcagag
gatctcgaagcagctcttcctcacatcaatggagacgctgtgtctctagatggtgtgatc
gccagagaaaacggtttcatatactctggttgctgtacaccggaagttcattttccaata
accgtaacggagaagcaagagaaggcattggtgcgaatggaaatagcaagaggcaaaaag
agaaaggctgagaaggagatcgccgaggagaatagtaagaagcgtaggttggtgaaaaag
ttgaagaaggcaacggagaagtacgaatgtttaacagctacggcagactcttag
DBGET
integrated database retrieval system
