Camelina sativa (false flax): 104771568
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Entry
104771568 CDS
T05044
Name
(RefSeq) ABC transporter I family member 21-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104771568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104771568
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104771568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
nSTAND3
AAA_29
ORC-CDC6-like
AAA_15
SMC_N
AAA_23
AAA_28
AAA_18
AAA_25
nSTAND_NTPase5
NACHT
AAA
SRP54
AAA_24
AAA_30
PduV-EutP
Zeta_toxin
AAA_22
AAA_5
AAA_33
Arf
AAA_16
AAA_14
Motif
Other DBs
NCBI-GeneID:
104771568
NCBI-ProteinID:
XP_010494411
UniProt:
A0ABM0Y2E2
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Position
20:complement(24042769..24045307)
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AA seq
281 aa
AA seq
DB search
MAVNGENGGGAIRVSGMQFSYDVQDPIFFDFNIDLSAGSRCLLVGANGSGKTTLLKILAG
KHMVGGKNVVQVLDRSAFHDTELVCSGDLSYLGGSWSKTAGSAGDIPLQGDFSAEHMIFG
VEGIDPVRREKLIDLLDINLQWRMHKVSDGQRRRVQICMGLLHPFKVLLLDEVTVDLDVV
ARMDLLEFFKEECEQRGATIVYATHIFDGLETWASHLAYIHGGELKLSAKLDDIKDLKTS
PNLLSVVESWLRSETKVEKKTKKKPVVTSPFMSSRQMAYYR
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaacggtgaaaatggtggcggtgcgattagggttagcggaatgcagttttct
tacgatgtccaggatcctattttcttcgatttcaacatcgatctctccgcgggatctcgt
tgtctcttggttggtgctaatggatctgggaaaactacattattgaagattctggctgga
aagcatatggttggaggaaagaacgttgtacaagtgcttgatcgttcggcatttcatgat
acagagcttgtttgtagtggtgatttgtcttaccttggaggatcatggagtaaaaccgct
ggttctgctggtgacattcctcttcagggagatttctcagcagaacatatgatatttgga
gttgaagggattgatcctgtgagaagagagaagttgattgatcttcttgatatcaatctt
caatggcgtatgcataaggtttctgatggccagagacgtcgtgtgcaaatatgtatgggt
cttttacatcctttcaaggtattattactggatgaggttactgttgacctcgacgttgtt
gctaggatggatttgttggaattctttaaagaagaatgcgaacagagaggagctacaatt
gtatatgcaactcatattttcgacggtctagagacatgggctagtcatctagcttacatt
catggaggagaactgaaactctcggccaaactggatgatatcaaggatctcaaaacctca
ccaaatctgctctctgttgttgaatcttggctccggtctgaaaccaaagtcgagaagaag
acgaagaagaaacctgttgttacgtctccatttatgtcctctagacaaatggcgtattac
cgatga
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