Camelina sativa (false flax): 104772508
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Entry
104772508 CDS
T05044
Name
(RefSeq) uncharacterized protein LOC104772508 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csat03036
]
104772508
03400 DNA repair and recombination proteins [BR:
csat03400
]
104772508
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104772508
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
104772508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
HATPase_c
Motif
Other DBs
NCBI-GeneID:
104772508
NCBI-ProteinID:
XP_019097769
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Position
20:13976307..13984352
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AA seq
810 aa
AA seq
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MSMQNFVNLVKKEYDNARKDCLLLSKRTRVDWNSGGKFSLESDGEKMSAVVRFAAFKPNI
CHIIRLHDGSGIASTMYENLWDLTPDTDLLKELPEKYSFETALADLIDNSLQAVWPYREG
ARKLISVDISADRITVFDTGKGMDSSEQNSIDKWGKIGASLHRSQKTDAIGGDPPYLKPY
YGMFGYGGPYASMFLGRRTLVSSKTKESKKVFTLQFKKEALIDNRSILGKNWKTDGGMRD
PSEEEMKLSPQGSFTKVEIFESEFDIRLKDIYFPYIQCDELSKTGRTERLVVFQVNGEDL
AEITGGEVAITNLHSTGQVYSFEIRFTLSGGKRKETTQKANARLKFVYFPIVQGKESFEK
ILESLEEEGCKVSESFQTFGRVSVRRLGRLLPEVRWDSIPFMVRGNRASTLQKGFRRVKC
FVDLDAGFSPTPSKTDLASQNPFSVALRNFGNKPTVKEKDDDVSFEIFKEGRNVSYAQVD
DNFRDWVLKMHDTHDEEAASGEDEAVLIVGSLDKKALVISRDAVRVHKVVTRKGMSWKRG
QNIKILRGACAGVHNNNVYATIDYFLIEGFEDEAGGDTRILCRLIDRPESEGCKLSIIDG
ISKLEIGRSLSLPITIIDSGKCLPVDANEWNRKLEKQQEKAPSKIDLLDERDCREFGIDG
ELPVGDSVRAGRAPPKQIVAVVRPACFTSSTPSKKLDQLKLEQKHIVKMDEEMVMVVKLL
DTNMKPSDKNVKPVYSQRLCPTSRKGISGLYIFSLGSKLPNLFKKAGTHKFSFSIGNSIK
CNKTVVVRPSSKVARWELDDNLESLPCNVQ
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcaaaactttgtcaacctggtgaagaaggagtacgataatgctaggaaagac
tgtcttttgctgtctaagaggacgagggttgattggaactcaggcggaaagttttctctt
gagtcagatggcgagaagatgagtgccgttgttcgttttgctgcctttaagccgaacatt
tgtcatataatacgcctccatgacggttctggtatagcttccaccatgtatgagaacttg
tgggacttgacacctgatactgatcttcttaaagaactacctgaaaagtatagctttgag
acagctctcgcggatctaatagacaattcattgcaagctgtgtggccttatcgtgaagga
gctcggaaactgattagtgtggatatttctgctgaccggattacagtctttgataccggg
aaaggaatggacagtagtgagcaaaattctattgataaatggggtaagattggggcgtca
ttacatagatctcaaaaaaccgatgctattggaggcgatccaccatacctcaagccatac
tatgggatgttcggatatggaggtccttatgcttctatgttcttgggaaggcgtactttg
gtgtcttctaagacaaaagagtccaagaaagtattcactttgcagtttaagaaagaagcc
ttgattgacaatcggtctatattgggaaaaaactggaagactgatggtggcatgagggac
ccatcggaggaggaaatgaagttatcgcctcaaggaagctttacaaaggttgagatattt
gaatcagaatttgacatcaggcttaaggatatttactttccttacatccagtgtgatgaa
ctctccaaaactgggagaactgaaaggcttgtagtgtttcaggtcaatggggaagattta
gctgagataacaggtggagaggttgccattaccaacctacactccacgggtcaagtatat
tcatttgagattcgattcactctctccggtgggaaaagaaaagagacaacccaaaaggca
aatgctcgcctgaagtttgtttattttccaatcgtccagggaaaagaaagctttgagaaa
attttggagagtttagaagaggaaggatgcaaggtttctgaaagtttccaaacttttggt
cgtgtttcagtaagaaggcttggtcgtctacttccagaagtccgttgggattcaataccg
tttatggtgagaggaaacagagcgtctactttgcagaaaggcttccgaagagtaaaatgc
tttgttgatttggatgctggttttagcccaacgccgtccaaaaccgaccttgcgagccaa
aatcctttctcagtagctctaagaaattttggtaataaaccgacggtaaaagagaaggat
gatgatgtcagctttgagatttttaaagaaggaaggaatgtcagctacgcacaagttgac
gataattttagagattgggttctgaagatgcatgatacccatgatgaagaagctgcgtcg
ggtgaagatgaagctgtcctcattgttggatcactggataaaaaggcccttgtcatttcg
cgtgatgctgtgagggtgcacaaggtagttacgagaaaaggaatgtcatggaaacgtggt
cagaatataaagattctgagaggagcttgtgcaggggttcacaataacaatgtgtatgcc
accattgactattttctaatagaagggtttgaggacgaagcaggcggggatactcggatt
ttatgcaggcttatcgatcgccctgagagtgagggatgcaagctttcaatcattgatgga
atttcgaaactggaaattgggaggtctttatctttaccaatcactataatcgactctgga
aagtgcctacctgtagatgcaaacgaatggaatagaaaacttgagaagcaacaggaaaag
gcaccgtcaaaaattgatttgctggatgagagagattgcagagaatttggcattgatggg
gaattaccagttggtgattccgtgcgtgctgggcgagctcccccaaaacagattgtagca
gttgtccgacctgcatgcttcacgtcttcaacaccgtccaagaagttggaccagttgaag
ttggaacagaaacatattgttaagatggatgaagaaatggtcatggtagtaaagttgcta
gacacaaatatgaaaccgagtgataagaatgtcaaacctgtgtattcgcagcgcttgtgt
cctacatctcgtaaagggattagtggtctctacattttttcacttgggtccaagttaccg
aaccttttcaagaaagctggcactcacaaattttctttctccattggaaattcgatcaag
tgcaacaaaacggtggttgttaggccttcttcaaaggtagcaaggtgggaacttgacgat
aatctggagtcccttccatgcaatgttcagtaa
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