Camelina sativa (false flax): 104781817
Help
Entry
104781817 CDS
T05044
Name
(RefSeq) transcription factor PIF5 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
csat
Camelina sativa (false flax)
Pathway
csat04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104781817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104781817
Transcription factors [BR:
csat03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104781817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
104781817
NCBI-ProteinID:
XP_010504884
UniProt:
A0ABM0YRL3
LinkDB
All DBs
Position
4:complement(22334625..22337356)
Genome browser
AA seq
448 aa
AA seq
DB search
MEQVFADWNFEDNFHMSTNKRSIRPEDELEELLWRDGQVVLQSQARREPSVQLQSHKQDT
LRKPCNIFLDDQEIVPKPNNNALLDDQETVSWIQYPPDDVVDPFESEFSSHLFSTVNHLG
SPEKPRSVEETVKNEAQAMAPPKFRSSVITVGPSHCGRNQSTNDHQVTTLPVSMTDGSKN
VEERLDTSSGGSSGCSYGRNNKETVSGRSVTIDRKRKHVMDADQESVSQSDVPLTSTDDI
QVTGNKSSQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEA
IDYLKSLQMQLQVMWMGSGMAAAAAAAAATTPMMFPGVQSSPYINQMAMQSQMQLPQFPV
MNRSAPQNHPGLVCQNPVQLQLQAQNQILSEQLARYMGGFPQMPPAANQAVQQQQQPTDM
MRFGSPAGPQSQLSAPASTDSLRMGKIG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagtgtttgctgattggaattttgaagataattttcacatgtccactaataaa
agatcaatcagaccagaagatgaactagaggagctattgtggagagatggccaagtagtt
ttgcagagccaagctcgcagagaaccatcagtccaactccaatcccacaaacaagacacc
ctaagaaaaccttgcaacatttttcttgacgaccaagaaatagtaccaaagcctaataac
aacgctcttcttgatgatcaagaaaccgtctcctggatccaataccctcccgatgacgtc
gtagaccccttcgaatctgagttctcctctcatctcttctctacagtcaatcacctcggc
agtccagagaagccacggtcggtcgaagagacagttaagaacgaggctcaggccatggct
cctcccaagtttaggtcctctgttataaccgtcgggccgagccattgtggtagaaaccag
tctacgaatgatcatcaagtgactacacttccggtatctatgactgatggaagcaagaac
gtcgaagaaagactcgatacttcgtccggtggctcgtccggttgcagctacggaaggaac
aacaaagaaaccgttagtggaagaagcgttaccattgaccgtaaaagaaaacatgtaatg
gacgcggatcaggaatctgtctctcagtcagatgtacctttgacctcgaccgatgatatt
caagtcacaggaaacaaatcgagccaacggtctggatctacacgaagaagccgtgcagcc
gaagttcataatctctcagaaaggaggaggagagatcgaatcaacgaaagaatgaaagct
cttcaagaactcatacctcattgcagtaaaacagataaagcttcgatattggatgaagcg
attgattacttgaaatcacttcaaatgcaactccaagtgatgtggatgggaagtggaatg
gcggcggcggcggcagcagcagcagcaacgactccgatgatgtttcccggcgtacaatca
tcaccgtacattaatcagatggctatgcagagtcaaatgcaattgcctcaattcccggtt
atgaaccggtcagctccgcagaaccatcccggtttagtatgtcaaaacccggttcaactc
cagctccaagcacagaaccaaatcctatcggagcagctcgctaggtacatgggcgggttc
cctcagatgccgccggcggcgaatcaggcagtgcaacaacaacaacagccaacggacatg
atgagatttgggtctccggcgggaccgcaaagtcaactgtcggcaccggcttccaccgac
agtcttcgtatgggtaaaataggctga
DBGET
integrated database retrieval system
