Entry |
|
Name |
(RefSeq) transcription factor PIF4
|
KO |
K16189 | phytochrome-interacting factor |
|
Organism |
csat Camelina sativa (false flax)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csat00001]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
104782811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:csat03000]
104782811
Transcription factors [BR:csat03000]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
104782811
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4:27501844..27504598
|
AA seq |
422 aa
MEDQGWGFEENYSLSTNRRSTRPQDELVELLWRDGKVVLQSQTHRDQTETQKQDHRGGAL
RSNTFLEDQETVSWIQYPPDEDPFETDDFSSHFFSTVDPLQRPTSETVKPTSGPDPPQVM
DKPKACPDPPQVMPPPKFRLTDSSSGNMELGKEQYSVMTIGLSHCESNPSQSDLDVSMSH
ARSKNIEDKLYPNASSSSGGSSDCSFAKDIKEMASGKSITTDRKRKHIMDTDESVSQSYA
IGNKSNQRSGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAID
YLKSLQLQLQVMWMGSGMTAAPMMFPGVQPPPFMRQMQSPGQLPRFPVMDRSAIQNNPGL
VCQNPVQNQIFSDRFARFIGGFPQMQAASQPMEMLRFGLPAGQQSQQPPAPTKTTDGPRV
DH |
NT seq |
1269 nt +upstreamnt +downstreamnt
atggaagaccaaggttggggttttgaggagaattatagtttgtccactaatagaagatct
acaaggccacaagatgaacttgtggagttgttgtggcgagatgggaaagtggttctgcag
agccaaactcatagagaccaaaccgaaacacaaaaacaagatcatcgtggtggagcccta
agatccaacacctttcttgaagatcaagaaactgtttcttggatccaataccctccagat
gaagacccatttgaaaccgacgacttctcctcccatttcttctcaaccgtcgatcccctc
cagagaccaacctcagagactgttaagcctacgtccggtcctgacccacctcaagtcatg
gataagcctaaggcctgtcctgaccctcctcaagtcatgcctcctcctaaatttaggtta
accgattcatcgtcagggaacatggaactaggaaaggaacagtactcggtgatgaccatt
ggacttagccattgcgagagcaacccatcccagagcgatcttgatgtctcaatgagtcat
gctcgaagcaaaaacatcgaagataaactttatccgaacgcaagttcctcatccggtggc
tcctctgattgcagctttgccaaggatatcaaagaaatggctagtggaaaaagcatcaca
acagaccgtaagagaaaacacataatggacactgatgaatctgtgtctcaatcatatgca
ataggtaacaagtcgaaccaacgatcaggatcaacacgaaggagtcgagcagctgaagtt
cataatctctccgaaaggaggaggagagataggatcaatgagagaatgaaggctttgcaa
gaactaatacctcactgcagtaaaactgataaggcttcgattttggacgaagccatagac
tatttgaaatcacttcagctacagcttcaagtgatgtggatggggagtggaatgacggcg
gctccgatgatgttccccggtgtacagcctccaccgttcatgcgtcagatgcagagcccg
ggacagttacctcgatttccggttatggataggtccgcaattcagaacaatcccggttta
gtttgtcagaatccggtacaaaaccagatattctctgaccggtttgctaggttcatcggg
ggtttcccacagatgcaggccgcgtctcagccgatggagatgttgagatttgggttaccg
gcgggacagcaaagtcaacaaccgcctgcgccgaccaagaccaccgacggtcctcgtgtg
gatcactag |