KEGG   Camelina sativa (false flax): 104787318
Entry
104787318         CDS       T05044                                 
Name
(RefSeq) 5'-3' exoribonuclease 4
  KO
K20553  5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
csat  Camelina sativa (false flax)
Pathway
csat04016  MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:csat00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04016 MAPK signaling pathway - plant
    104787318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104787318
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     104787318
SSDB
Motif
Pfam: XRN_M XRN_N zf-CCHC zf-CCHC_2
Other DBs
NCBI-GeneID: 104787318
NCBI-ProteinID: XP_010511186
LinkDB
Position
5:21156047..21164863
AA seq 948 aa
MGVPAFYRWLADRYPKSISDVVEEEPTDGGGDLIPVDITRPNPNGFEFDNLYLDMNGIIH
PCFHPEGKPAPATYDDVFKSMFEYIDHLFTLIRPRKILYLAIDGVAPRAKMNQQRSRRFR
AAKDAAEAEAEEDRLRKEFETEGQILSAKEKAETADSNVITPGTPFMAILSVALQYYIQS
RLNRNPGWRYVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLS
LATHEVHFSILREVITYPGQQEKCFVCGQTGHFAADCPGKSGSTNAASDIPIHKKKYQFL
NIWVLREYLQYELAIPDPPFVINFERIIDDFVFLCFFVGNDFLPHMPTLEIREGAINLLM
HVYRKEFSVMGGYLTDSGEVLLDRVEHFIQAVAVNEDKIFQKRTRIKQSMENNEEMKQRS
RRDPSEVPPEPIDDKIKLGEPGYKERYYAEKFCTTNPEETEQIKQDMVLKYVEGLCWVCR
YYYQGVCSWQWFYPYHYAPFASDLKNLSDLEITFFIGEPFKPFDQLMGTLPAASSNALPG
EYRKLMTDPSSPILKFYPADFEIDMNGKRFAWQGIAKLPFIEEKLLLTATRKLEETLTVE
ERQRNSVMLDLLYVHPAHPLGQRILQYYHFYQHMPPHECLPWMIDPNSSQGMNGFLWISE
RNGFQTRVDSPVNGLPWIEQNRALNVTYLCPAKHSHISEPPRGAIIPDKILTSADIKPFP
PLWHEDNSNRRRQARDRPQVAGAIAGPSLGEAAHRLIKNTLNMKSSTGSASGLIDPNGYY
RNVPGNHYYGGVNRPRAPGPSSHRRAYDDDSSYYYYGKYNNSSQGTFSNGPRYPGPSNGS
QDYNRNYNSKVVVEQQNRGGLRAGMSGLSIEDNGSRSKQLYSSYTEAANANLNPLPSPPT
QWIGTQPGGNFVGGYYREGVGYGETNGKPVKKVIYQAKTQPSHRGANI
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgggagtcccggcgttttacagatggctcgccgaccgataccccaagtcaattagcgac
gtcgttgaggaagaacctaccgatggaggtggtgacctaatccctgttgatatcaccaga
cctaacccgaacggctttgaatttgataatttgtatctcgacatgaatggtatcattcat
ccttgtttccaccctgaaggaaagcctgcaccagccacgtacgatgatgtatttaaatcg
atgtttgagtacattgaccatctttttaccttaatacgtccgaggaagattctttatttg
gctatagatggtgttgcacccagagcaaagatgaatcagcagcgttctcgacgtttcagg
gctgcaaaggatgctgcagaggctgaagctgaggaagatagattgagaaaagaatttgag
actgagggccaaatcttgtctgctaaagaaaaagcagaaaccgccgattcaaatgtcatt
actcctgggaccccttttatggctatactctcagtagctcttcagtattacatccaatct
aggttgaaccgtaaccctggctggagatatgttaaggtaatactttctgattcaaatgtt
ccgggcgaaggagaacacaagataatgtcatacattcgtctccaacgtaatcttcctggt
tttgatccaaatacacggcattgtctatacggtctggatgcagatttgataatgctctct
ctagccacacatgaagttcacttttcaatcttaagagaggttatcacttaccctggccaa
caagagaaatgctttgtgtgtggacaaactggtcactttgcggcagattgccctggaaaa
tcaggtagcacaaatgcagcatctgatattccaatccacaagaaaaaataccagttcctg
aacatttgggtgttgcgagaatatctgcaatatgaattggcaattccagatcctcctttt
gtgatcaattttgagagaattatagacgactttgtattcctttgcttttttgttggcaat
gacttccttcctcatatgcctacattggaaattcgagagggagctataaacttgctgatg
catgtttacagaaaggagttttcagttatgggaggctatttaacagattctggtgaggta
ttactagatagggtagagcatttcattcaagctgttgctgttaatgaagataaaatattt
cagaaaagaacacggataaaacagtcaatggagaacaatgaagaaatgaaacaacgatca
agaagagatccatctgaggtaccacctgaaccgatagacgataagattaagctaggagaa
ccaggctacaaggagaggtattatgcagagaaattttgtacgaccaatccagaggaaact
gagcaaattaaacaagacatggtactaaaatatgttgaaggtttgtgctgggtttgccgg
tactactaccaaggtgtatgctcttggcaatggttttacccataccattatgctccattt
gcttcagatcttaagaatctatctgatttggagatcacatttttcattggagagcccttt
aaaccttttgaccagttaatggggacactgccggctgcaagttcaaatgctctgcctgga
gaataccggaagttgatgactgatccctcatccccgatcctgaaattttaccctgccgat
tttgagattgacatgaatggaaagcgcttcgcctggcagggtattgcaaaacttcctttc
attgaggagaaattattgttaactgctacaaggaagcttgaagaaacgctaacggtggaa
gaacggcaacgcaacagcgtgatgcttgacttgttatacgtacaccccgctcatccactg
ggccaacggattctgcagtactaccatttctaccagcacatgcctccacatgaatgtctt
ccatggatgattgacccgaattctagccaaggaatgaacggttttctctggattagtgaa
aggaatggtttccaaactagagtggattcccctgtcaatggtttgccatggattgagcag
aaccgagccttaaacgttacgtacctgtgtcctgccaaacactctcatatctcagaacca
ccaagaggagcgatcattccggacaagatcttgacgtcagcagatataaagccatttccc
cctttatggcatgaagacaatagcaaccgacgtcgacaagcccgagataggcctcaagtg
gctggagctatagccggaccttcgctgggagaagcagctcatcgtctgatcaaaaacacc
cttaacatgaaatcctctactggttcggcttcaggattaattgacccaaatggatactac
cgtaatgtaccgggtaatcattattatggtggagtcaatagaccaagagcaccgggtccc
tcttctcacaggagagcttatgatgatgactcgagctattactactatggaaagtataac
aatagctcacagggaacgtttagcaacggtccaagatatcctggtccatcaaatggatca
caagactataaccgaaactacaactccaaggtagtagtagagcagcaaaaccgtggtgga
cttagagctggaatgtctggtttatcgatagaagataacggaagcagaagcaaacagttg
tattcaagttatacagaagctgctaatgcaaatttgaacccgttaccctcaccacccacc
caatggatcggtacacagccaggaggtaatttcgtcggtggatactacagggaaggagtt
gggtatggtgaaacaaatggaaagccggtaaagaaagtaatttatcaggccaagacacaa
ccaagtcatcgaggcgcaaacatatga

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