Cannabis sativa (hemp): 115699045
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Entry
115699045 CDS
T08987
Name
(RefSeq) DNA repair protein RAD16 isoform X1
KO
K15083
DNA repair protein RAD16
Organism
csav
Cannabis sativa (hemp)
Brite
KEGG Orthology (KO) [BR:
csav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csav03400
]
115699045
DNA repair and recombination proteins [BR:
csav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
115699045
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4
zf-RING_UBOX
zf-C2HC_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-Di19
Motif
Other DBs
NCBI-GeneID:
115699045
NCBI-ProteinID:
XP_030482113
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Position
8:complement(40524765..40530715)
Genome browser
AA seq
888 aa
AA seq
DB search
MELRSRSRSLKTKSDSANDGDGHEEDEIDIDNSDSSDDEIFVASSSDDEKISSDEDEEFH
PYKRRKVGYNRGKTEIGLDKTIKKDEIKDEIDLALEGVVQKMKGKKKKSKKGKEEIEDEV
DLALEGVVQKMKEKKKKSKKRDSKPVLMWNIWKNENEKWLDENFSKDLDLENQNEIVTEV
AEAPADMVVDLLRYQKEWLAWALKQEGTPNRGGILADEMGMGKTIQAISLVLAKRELYRA
SGVTSDSSEGTSTDLPRIKSTLVICPVVAVNQWENEIDKFTSKGSTKVLVYHGANRGKVS
KKFSDYDFVLTTYSIVEADYRRHTMPAKEKCPYCSKKFNEKRLTVHLKYYCGPNALKTEK
QSKQQRKKFQAMPSTPKLDDKSSKGKKPAKQNEKEALAKEESALHAVNWERIILDEAHYI
KSRRSNTARAVLSLESSYKWALSGTPLQNRVGELYSLLRFLQIVPYSFYFCKDCDCKVLD
HSSSGDCSKCPHNSVRHFCWWNKFIATPIQTYVNQDPGKRAMMLLKHKILKKVVLRRTKQ
GRAADLALPPRIISLRRDVLDIKEQDYYESLYNESQAQFNTYIEAGTLMNNYAHIFDLLT
RLRQAVDHPYLVVYSATAAIRNANKVEIDNEERVCGICHEPAENHVVTSCEHAFCKACLI
DYAASLGQVSCPSCSKLLTVDLTSNADNGNHTSKTTIKGFRASSILNRVQLDNFQTSTKI
EALREEIRFMIEKDGSAKGIVFSQFTSFLDLINYSLEKSGIKCVQLNGSMTMVARNVAIK
KFIEDPECKIFLMSLKAGGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRI
VRFVIENTIEERILKLQEKKELVFEGTVGGCSAALGKLTEADMRFLFT
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgttcccgttcccgttccctcaaaacaaagtccgactctgccaacgatgga
gatggacatgaggaagacgagattgatattgacaattcggatagctctgatgatgaaatt
ttcgtagcgtcatcttcagatgatgaaaaaatcagtagcgatgaagatgaggagtttcac
ccttacaaaaggaggaaagtgggatacaaccggggtaaaactgagattgggttggataaa
actattaaaaaggatgagattaaggatgaaatagacctggctctcgagggagtagtacaa
aaaatgaaaggaaagaaaaagaagtcaaagaaagggaaagaggagattgaggatgaagta
gacctggctcttgagggagtagtacaaaaaatgaaagaaaagaaaaagaagtcaaagaaa
agggactcaaagccagttttgatgtggaacatttggaaaaatgagaatgagaaatggctt
gatgagaatttttcaaaagatcttgacttggagaatcagaatgaaatagttactgaagtg
gcagaagcacctgcggatatggttgtggatttgctgaggtaccaaaaggaatggctagct
tgggctttaaaacaagaaggtactccaaatagaggaggaatccttgcagatgagatggga
atggggaaaaccattcaagccatttcacttgtacttgccaaacgagaactttatagggca
agtggtgtaacttctgattcatcagaaggcacatcaacagacctgcctcgaattaagagc
acgcttgtaatctgtcctgttgttgctgtgaatcagtgggaaaatgaaattgataagttt
acatcaaaggggagcacgaaggtactggtttatcatggggcaaacagaggaaaagtttcc
aagaagttttctgattatgattttgtcttaactacttactcaattgttgaggctgattac
aggaggcatacgatgcctgccaaagagaaatgcccttactgttcaaagaagtttaatgag
aaacgtttgacagtgcacttgaaatactattgtggcccgaatgctttgaaaactgaaaag
cagtctaagcaacaaaggaagaagtttcaagctatgccatcaacaccgaagttggatgac
aaatcttctaaaggcaagaagccagcgaagcaaaacgagaaggaagcattggctaaggag
gaatcggccttacatgctgtgaattgggaacgtattattttggatgaggcgcattatatc
aaatctagacgaagtaatactgccagagctgttctttccttagagtcttcatacaaatgg
gctttaagtggtactcctcttcagaaccgtgttggtgaactttactctttgttacgcttt
ctacaaattgttccatactccttttacttctgtaaggactgtgattgcaaagttcttgat
catagttcctcaggagattgttcaaaatgccctcataattctgttagacatttttgttgg
tggaataaatttattgctacacctatacaaacatatgtgaatcaagaccctgggaaaagg
gcgatgatgttgcttaagcacaaaattttaaagaaagtagtgctacgaagaactaaacag
ggaagagctgctgatcttgctcttcctccacgaataatatctttgaggagggatgtgctc
gatatcaaggagcaggattattacgagtcattatacaatgagagtcaggcacagtttaac
acatatatcgaagcaggaacacttatgaataattatgcccacatatttgaccttctcaca
cgtttgcgtcaggcagttgaccatccgtaccttgtggtatactctgcaactgcagcaatt
agaaatgcaaacaaggtggaaatcgataatgaagagcgagtatgtggcatatgtcacgag
ccagcagaaaatcatgtggttacctcttgtgaacatgccttctgcaaagcttgtttgatt
gattacgctgcttccttaggacaagtctcatgcccatcttgttcgaaattgcttactgta
gatttgacatcaaatgcagataatgggaatcacaccagtaaaactacaataaagggcttc
agggcatcaagtattctaaacagagttcaacttgacaattttcaaacaagcacaaaaatt
gaggctctgagagaagaaatcaggttcatgattgagaaggatggttccgcaaaaggaata
gttttcagccagttcacatcattcttggatctcataaactactccctcgagaagtccggt
ataaaatgtgttcagttgaatggaagcatgactatggttgccaggaatgttgctattaag
aaatttattgaagatccagaatgcaagatttttcttatgagtctcaaagctggaggcgtt
gctctcaatcttactgttgcatcacatgttttcatgatggatccatggtggaaccctgct
gtcgagcggcaagcacaagatagaattcaccgtataggacagtataagccaataagaatt
gttagattcgttatagagaatacaattgaggaaagaattctgaagctgcaagaaaagaag
gaactagtgtttgaaggtactgttggtggttgctcagcagctttgggaaaattaacagaa
gcagacatgagatttcttttcacctga
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